| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4316 |
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| Symbol | |
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| ID | 8360489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5373951 |
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| End bp | 5374805 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966477 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123965 |
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| Protein GI | 256423312 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.131308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.131426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATA TCGATTCTTT ACGGGAGCAT TTCAGCCAGA ACAGCCAGTT GCCGATTCGC
CTTGTCTCTC CGGGTTTTGG CCATTTGCCA CAGGCTGACG TAGAAAAATA TGGCATTACG
CAACGTTTAC CTTATTACTT CTTTCTCTTT ATCCTGGATG GCCAAAGCAG GCGCAGTGCG
GATCTGGAAA AGTTTGATAT CAGCAAACAT GAGTTGCTTT TCTTTCTGCC ACACCAGGTT
CAGCAATTTC CCGTGGCTGC ACATGGTAAG GATTACTATA AACTGGGCTT TTATGAAGAA
TGCCTGTCCC GTTTACCCAG GCAATATCGC TTCCTGCTCA ATCCTCTCAA CCAGCAAAAG
ATCAGTTTCG CGCCCGACGC AGCTATCAGA CTACAAGCTA TTTTTGAAAT ACTGCAAAAT
TTACTACGTA CCATAGATAC CGATCCTGAG CTTATTCTGG CCCATCTCAA TAGTTTACTA
ACGGAAATCA ATATTGCCTA TTTCACCAAT GATAAGAAGC CCGCAGATGA CAGGCTGGCT
AAATTTATCG CCTTCAAGAT GTTTGTTGAG GACAACCTGA TCAATCACCC GAGTATCCGG
GAGATTGCGG AGGAATTGAT GGTAAGCACT GATAGCTTAT ACCAGATTGT TAAACAATAC
TCCGGCCTCT CCCCTAAAGA ATTCATCACA AACCGCCTGA TACTGGAAGC CAGACGCCGT
ATGTATCATG GGGAACTGTC TTCTGTAAAA GAATTGGCTT TCGAACTTGG GTTCAATGAC
CCTGATTATT TCTCCCGTTT GTTTAAAAAA GTAACCGGTA AAACGGTTGC CGGTTTTTTT
CAGGATTTGT CCTGA
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| Protein sequence | MRNIDSLREH FSQNSQLPIR LVSPGFGHLP QADVEKYGIT QRLPYYFFLF ILDGQSRRSA
DLEKFDISKH ELLFFLPHQV QQFPVAAHGK DYYKLGFYEE CLSRLPRQYR FLLNPLNQQK
ISFAPDAAIR LQAIFEILQN LLRTIDTDPE LILAHLNSLL TEINIAYFTN DKKPADDRLA
KFIAFKMFVE DNLINHPSIR EIAEELMVST DSLYQIVKQY SGLSPKEFIT NRLILEARRR
MYHGELSSVK ELAFELGFND PDYFSRLFKK VTGKTVAGFF QDLS
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