Gene Cpin_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4299 
Symbol 
ID8360472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5359202 
End bp5359768 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content43% 
IMG OID644966461 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003123949 
Protein GI256423296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.293289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.211021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC TTGTTTCTTT CTTTCATGTT TCTCTGGATG GATATATCGC CGGCCTCAAT 
GGCGAAATGG ATTGGATAAA AGTCGATGAA GAGATATTTG AACATGTCGG TGACCGTGTT
AAGGGAAGTG ATACCGCATT GTATGGCCGT GTTACCTGGC AAATGATGGA AGGTTACTGG
CCTACCGCTG GTGACGAACC AAATGCCAGC AAACATGATA TCGAGCATTC CGCCTGGTAT
AAGAAAGCTA AAAAAGTCGT GCTGTCAAAA AGTATGCAGA ACGAACAGCT GCCCAATACC
ACTTTCATTG GCGAGGATGT GGAAGATCGT ATAAAAACGT TAAAACAAGC GGATGGCACT
GAGATACTCA TATTTGGCAG TCCTTCGGCA ACACACTCCT TACTGCAATA TGACCTGATA
GATGAATTCT GGTTATTTGT AAACCCAATT CTGCTGAGTA AGGGCATTCC TCTCTTCAAA
AATGTAACAG AGAAAACGCC GCTGACACTG GTAAGTTCAA AAACCTTCAC CAACGGAGTC
GTGTGTATGC ATTATAAGAA AGCTTAA
 
Protein sequence
MRKLVSFFHV SLDGYIAGLN GEMDWIKVDE EIFEHVGDRV KGSDTALYGR VTWQMMEGYW 
PTAGDEPNAS KHDIEHSAWY KKAKKVVLSK SMQNEQLPNT TFIGEDVEDR IKTLKQADGT
EILIFGSPSA THSLLQYDLI DEFWLFVNPI LLSKGIPLFK NVTEKTPLTL VSSKTFTNGV
VCMHYKKA