Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4272 |
Symbol | |
ID | 8360445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5335503 |
End bp | 5335952 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966435 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003123923 |
Protein GI | 256423270 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.510368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.109894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA GAGAAATCAC CTATGTATGT ATCACCGTAC TAATCATGTG TATACCCATG GCGATCATTG CGCATAATGA TCAGCGTACA CCCCTATCCT CTGCAATATA CGACTGGAAT AAAATTAAAG TTGAAGCTAC TAAAACGGGA GAAAAACGAC AATTTCTGCA AGCGCCCACT CCGACACTGG ATGAATTGGA GCTACATGTA ACTACTTTGA ATCCTGGAGA GGCGCCACAT CCCCCACATC AACATCCCGA CGAAGAATTG ATTATTGTAA AAGAGGGAAT AGTTGAATCG ACGGTGAACA AGACCACGAA ACGCGTCGGC CCGGGCTCGG TTATTTTCCA GGCATCTAAT CAACTGCATG GTATCAGGAA TGTAGGCGCT ACTCAGGCAG TATACTATGT TATTAAATGG AAGACAGAAA AGACGCCTAG GGGTAAGTAA
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Protein sequence | MTKREITYVC ITVLIMCIPM AIIAHNDQRT PLSSAIYDWN KIKVEATKTG EKRQFLQAPT PTLDELELHV TTLNPGEAPH PPHQHPDEEL IIVKEGIVES TVNKTTKRVG PGSVIFQASN QLHGIRNVGA TQAVYYVIKW KTEKTPRGK
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