Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4258 |
Symbol | |
ID | 8360431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5320160 |
End bp | 5320513 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644966424 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003123912 |
Protein GI | 256423259 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.495446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.515544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATGTA AAATAGCAGA GTTCCAACAG GAACAAAAGA AGAGAATGAG ATCTGTGCAA GATGCAATGG ATGCGCTAAA TGGCAAGTGG AAGATCGCTA TTATTTCATC AATTTGTTGC TATGGGAAAC GGCGGTTTTC TGACATTTTG AATGATATAG ACGGAATTTC CAACAGAATG CTAAGCAAAG AATTAAGGGA ATTAGAAATA AACCAGATAG TAAAACGGGC CATATCAGAC ATTCATCCCA TCACTGTTCA ATATGAACTT ACAGAACACG GGGATACACT ACAAACCATT ATTAGTAATC TCTCTGACTG GGGCATTGCT CACCGGAAAA AGATAGTTGG GTAA
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Protein sequence | MGCKIAEFQQ EQKKRMRSVQ DAMDALNGKW KIAIISSICC YGKRRFSDIL NDIDGISNRM LSKELRELEI NQIVKRAISD IHPITVQYEL TEHGDTLQTI ISNLSDWGIA HRKKIVG
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