Gene Cpin_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4254 
Symbol 
ID8360427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5316077 
End bp5317255 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID644966420 
Productmonooxygenase FAD-binding 
Protein accessionYP_003123908 
Protein GI256423255 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAA TAGCAGCTAA AAAAGTGGCC ATCATTGGCG GTGGCCCGGG TGGCTTAACG 
CTGGCCCGCC TGTTACAATT GAAAGGCGCG GATGTGACCG TGTATGAAAG AGATGCGAAC
GCAGAAGCCC GCGTACAGGG CGCCACACTT GATCTTCATT TTGAATCGGG TTTGAAAGCC
ATTAAAGCCA TGGGCCTGCG TGATGCTTTC CTCAACAACT ACCGCCCCGG TGCGGAAAAA
GGTCGGGTGA TCGATAAATA TGGCAAAATC GTTTACGACG AACATAGTAC GGACTTCGAG
CCGATGATGA ACGTGCTGGA CCTGGACAGT GAATACGCCC GCCCGGAAAT AGACCGGGGG
CCGCTGCGCG ATATTTTGCT GAACTCCCTT CTGCCCGGCA CCGTGGTGTG GGACAGCCAG
TTTAAAAACA TGATACCGCT AGGCCATGGC TGGAAAATCG AATTCAGGAA CGGCCATACC
GTTACCGCCG ATATTGTGAT AGGTGCAGAT GGCGGCAATT CCAAAGTGCG CCCGTTTGTG
ACGGACATTC AGCCCAGCTA CACAGGCATA ATGATCGTAC AGGGCAATGT GGGCCATGCG
GCTACCACCG TGCCCCAGGC CAGTGAACTA CTCAAAGGCG GTAAAGTCTA CGTACATGCC
GATGGAAAAT ACCTGCACAT TTCTTCCAAA GGTGATGGCA GCATAGATTT TTACTTTGTC
GAAGAAAAGC CGGAAGGTTG GTGGAACAAC AGCGGGGTAG ATTTCTCCGA TGGCCGGCAG
GTGCTGGCCT GGTTCCTGTC TGAAACACGG GGTTGGAATG ATGTTTGGGC GCCCATGTTC
GAGAAGGCAG ATTCGCCTTA TTTATTGCGC CCGCAATATT GTATTCCCTT TGATCAAAGC
TGGGAAGCCC ATGCCAATGT TACGCTGCTG GGCGATGCGG CCCACATCAT GCCGCCCTCC
GGCGAAGGCG TGAACCTGGC CATGCTGGAT GCACTGGAAC TGAGTGAGAG ACTTACCAGC
GGAGATTTTA TAGATATCAA ATCGGCCATT GCAGCGTATG AAGCGGCCAT GCAGGAGAGG
GGCACGGCGG AAGCGCGATC TTCCATCGAG ATGAGCCAAT GGATGCGGGC GGAAGACGCA
CAGGAGCGAC TGTTGCAACT ATTTAACCAC GTGGAATAA
 
Protein sequence
MMLIAAKKVA IIGGGPGGLT LARLLQLKGA DVTVYERDAN AEARVQGATL DLHFESGLKA 
IKAMGLRDAF LNNYRPGAEK GRVIDKYGKI VYDEHSTDFE PMMNVLDLDS EYARPEIDRG
PLRDILLNSL LPGTVVWDSQ FKNMIPLGHG WKIEFRNGHT VTADIVIGAD GGNSKVRPFV
TDIQPSYTGI MIVQGNVGHA ATTVPQASEL LKGGKVYVHA DGKYLHISSK GDGSIDFYFV
EEKPEGWWNN SGVDFSDGRQ VLAWFLSETR GWNDVWAPMF EKADSPYLLR PQYCIPFDQS
WEAHANVTLL GDAAHIMPPS GEGVNLAMLD ALELSERLTS GDFIDIKSAI AAYEAAMQER
GTAEARSSIE MSQWMRAEDA QERLLQLFNH VE