Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4243 |
Symbol | |
ID | 8360416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5306836 |
End bp | 5307153 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644966410 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003123898 |
Protein GI | 256423245 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.333534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.800382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA AGTTAGACCA TGCTGACTGT CCTATTACAG AGACGATAGC CATGTTTGGA GGACGGTGGA AGGTGACAAT TTTACGTGTG CTTTTCAAAA ATACCAGACG TTTTGGTGAA ATCCAGGTTA GGATACCTTC TATTTCAAAG AAGGTGTTAA CCGAGCAACT AAGAGAGCTT GAAGCTGACG GCTTAATCAG CAGGAAACAG TACAAGGAAC TTCCCCCCCG GGTAGAGTAT GCGCTCACTG ATTTTGGAAA AAGCCTTTGC CCTTTGTTAA TTGATATAGT AGCTTGGAAA AGAAAAAATA TTGGATAA
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Protein sequence | MENKLDHADC PITETIAMFG GRWKVTILRV LFKNTRRFGE IQVRIPSISK KVLTEQLREL EADGLISRKQ YKELPPRVEY ALTDFGKSLC PLLIDIVAWK RKNIG
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