Gene Cpin_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4237 
Symbol 
ID8360410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5299958 
End bp5300335 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content43% 
IMG OID644966404 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003123892 
Protein GI256423239 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.940949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATTA AAAAGACTAC TCCGACGCTC AATTGTGGAC TTGACCTGGT TGGTGAAGTA 
TTGTATGGAA AATGGAAGAT CCGTATTCTT TGGTTCATCC ATATAGGCAA CTTACGGCCA
AGTGAACTTC AGCGGAAAAT TCCGGATGTA ACCAGACGGG TGTTGAATGT GCAACTGAAG
GAACTTGAAG ATCATGAATT GATCACTAAA AAGATCTTTC CGGTTTTGCC TCCAAAGGTA
GAATACAGTC TTACTGAATT TGGCGAAACA CTCATTCCGT TGATTCAATT CATTGGTCTT
TGGGGCGACG AACATGAGGA GCGGCTACGT AGGGTCATTT TGCAGCACAA TGCTGGGGCA
TCGATTACAG AAAATTAG
 
Protein sequence
MYIKKTTPTL NCGLDLVGEV LYGKWKIRIL WFIHIGNLRP SELQRKIPDV TRRVLNVQLK 
ELEDHELITK KIFPVLPPKV EYSLTEFGET LIPLIQFIGL WGDEHEERLR RVILQHNAGA
SITEN