| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4225 |
|---|
| Symbol | |
|---|
| ID | 8360398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5282184 |
|---|
| End bp | 5284613 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644966394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003123882 |
|---|
| Protein GI | 256423229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.317527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTATTC ATAATAAGTG CCCCCAAAAG TGTCTAACTT TTTGGGGGCA TTTCATATCT
TCACTGACAC CACTAACTTA TACTTTTTAC GATAATTATA ACTACCCTGG TAAGCTCGCT
TTTGCGGGAG CAGATACCTT GAAATTGCAG GCGTCGGATA CACTTTATCC GACGAGAAGA
CCGGTGACAG ATATGTTGCA GGGATTGGTG ACAGGCACTA AAGTGCGGGT ACTGGGTACA
GATAAGTGGC TCACAACGAC TCCCTACTAT AATGATAAGT GGCAGGTTGT ACAGACTATT
AGTGAAAATA ACCAGGGTGG TAAAGATATA ATTTCAACAT TGTATAATTT TAAAGGTGTA
ATACTGACAG CTTATCTGCG TCATCAGAAT CCCAGAAGTG TGACGGCACA GACGACTTTG
CTGACAAGCA TGACCTATGA TAACGGAGGC CGTCTATTGA CAGTACGTAA GCGGTTAAAT
GATAATGTGG CTGACGAAAA AATTATCGCA TCCAACAGCT ATGATGAATC CGGCAGGCTG
CGTCTTAAAC GTCTGGGAGT CACAGCAGCA GGAAGTCTAT TAGATACATT AAATTATGCC
TACAATATCC GGGGTTGGTT ACAGGGCATC AACAAAAACT TTGTAAATAG TGGTAATGTC
GCATCTAACT GGTTCGGACA GGAACTGAGT TATGACTATG GTTTTACAGA TAATCAGTTT
AACGGCAATA TCGCCGGTGT TAAGTGGAAA ACCCGTGCAG ATAGCGCCAT GGCATATGGC
TATAATTATG ACAGGTCCAA TCGTCTGTTA AGTGCAGCCT TTACCCAGAG AAATGGTGAC
AACTGGGCAT TGAGAGTAAA AGACTTTTCT GTCACTAATA TAAGTTATGA TGCGAATGGC
AATATCAAAA CGATGTTGCA GAAGGGAATG GTTGGTACAG CTAGTAAAAC GATTGATAGT
CTGGTATATA CCTATCCAGC GAATAGTAAT AGGTTACTTG GCGTAAGAGA AATTGATTCA
TCTATTACGA GACCTGCAAT GTTAGGGGAT TTTATAGATG GTAATACCGG TACTAAAGAT
TATTCTTATG ATGCGAACGG TAATATGATC GCAGACCTGA ATAAAAAAAT TGCTTCCATT
ACCTATAATC ACCTGAATCT TCCTGAAGTT ATTACAGTAA CTGGTAAGGG AACAATTACC
TACACCTACG ATGCTTTAGG TACTAAATTA TCAAAAACAG TCGTTGATAA TATGGGTAGT
AGTCCTATGA CGACTGTCAC AAGATACGAC GGCGCATTTG TTTATAAGCA GGACAGTCTC
GAATTGATCA GCCATGAAGA AGGTAGGATA AGAGCTGTTT ATAACAGTGG CGCAGCCATC
CAATATGCAT ATGATTATTT CGAAAAGGAC CATTTAGGAA ATGTCAGAAC AGTTCTGACA
GATCAGACGG ACTTTACGAT GTATGCTGCT ACTATGGAGA CAAGCATGGC AGAGAAAGAA
GTTGCGTTAT TCAGCAATGT GACCGAAACC AGAGTTGACA AGCCAGCAGG ATATCCTCAA
GATGAGACAA CGCAGGAGAA TAAATCCGTA GCTAAATTAA ATGGCAAAAT TGGAGGAAAG
AAAATAGGAC CATCTATAGT GCTGCGAGTA ATGGTTGGTG ATACTGTACA GATCAATGCA
CGGGCCTTTT ATAAATCTGA AGGACCGACG GATAACGGAA ACCAAGCACC TATTGAGGAT
ATGGTGTCGG GTTTAGTGCA GGCTTTTGGA GGTGGCACTA GCGAAGGGTC TTCACATGCG
GCGACGGATA TATCAAATGG AACTCCGTTT ACTAACGATT TTTATGAAAA TGCCTATCAG
CGCCTAAAAG AGAAAAATTC TGATAATGGT TATTCAGATC GTCCGAAATC ATATTTAAAT
TTTGTATTGT TTGATGATGA TTTTAAATTA GTAGAGGATA ATAGTGGTGT TAGGCAGGTG
AAGTCGAGTC CGGATGAGTT GCAGGAGATT GGTGTAGAAA AAATGGCTGT GGCGAAGAGT
GGCTATATGT ATGTTTATAC CAGCAATGAG AGTCAGCAGG ATGTGTATTT TGATAACGTA
GTGATGGGAG TGAGTAGTGG GCCGTTGTTA GAAGAAACAC ATTACTATCC TTATGGGCTG
ACGATGGCGG GTATTTCTAC AAATGCGTTA AAGGGAGTGA ATTATGCCGT AAATCGGCAT
AAATATAATG GGAAGGAGTT GCAGACTAAA GAGTTTACAG ATGGTGCAGG CCTAGAATTG
TATGATTATG GAGCAAGAAT GTATGATAAT CAAATCGGCA GATGGCATGC AATAGACCCT
TTGGCAAGCA AATGGAATAA CTATTCTCCT TATAATTATA CATTGAATTC TCCCGTAAAT
TATGTTGATC CCAATGGCAA AGATGTATGA
|
|---|
| Protein sequence | MFIHNKCPQK CLTFWGHFIS SLTPLTYTFY DNYNYPGKLA FAGADTLKLQ ASDTLYPTRR
PVTDMLQGLV TGTKVRVLGT DKWLTTTPYY NDKWQVVQTI SENNQGGKDI ISTLYNFKGV
ILTAYLRHQN PRSVTAQTTL LTSMTYDNGG RLLTVRKRLN DNVADEKIIA SNSYDESGRL
RLKRLGVTAA GSLLDTLNYA YNIRGWLQGI NKNFVNSGNV ASNWFGQELS YDYGFTDNQF
NGNIAGVKWK TRADSAMAYG YNYDRSNRLL SAAFTQRNGD NWALRVKDFS VTNISYDANG
NIKTMLQKGM VGTASKTIDS LVYTYPANSN RLLGVREIDS SITRPAMLGD FIDGNTGTKD
YSYDANGNMI ADLNKKIASI TYNHLNLPEV ITVTGKGTIT YTYDALGTKL SKTVVDNMGS
SPMTTVTRYD GAFVYKQDSL ELISHEEGRI RAVYNSGAAI QYAYDYFEKD HLGNVRTVLT
DQTDFTMYAA TMETSMAEKE VALFSNVTET RVDKPAGYPQ DETTQENKSV AKLNGKIGGK
KIGPSIVLRV MVGDTVQINA RAFYKSEGPT DNGNQAPIED MVSGLVQAFG GGTSEGSSHA
ATDISNGTPF TNDFYENAYQ RLKEKNSDNG YSDRPKSYLN FVLFDDDFKL VEDNSGVRQV
KSSPDELQEI GVEKMAVAKS GYMYVYTSNE SQQDVYFDNV VMGVSSGPLL EETHYYPYGL
TMAGISTNAL KGVNYAVNRH KYNGKELQTK EFTDGAGLEL YDYGARMYDN QIGRWHAIDP
LASKWNNYSP YNYTLNSPVN YVDPNGKDV
|
|---|
| |