| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4196 |
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| Symbol | |
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| ID | 8360369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5244089 |
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| End bp | 5246347 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966365 |
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| Product | FG-GAP repeat protein |
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| Protein accession | YP_003123854 |
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| Protein GI | 256423201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000719971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.263746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTACCTGCT TGGCAGTATG CTGCTTGCTG TCTGCTCCGC ACATGCAAAC
ACAGACCCTA TCATTGAAAA AGGTACGCTT GACCAGATCC AGACACAACT CGCGCGTAGC
GAATATTTTA TCCACTGGCA AAATTACGCG GGCATCTACC AGAGTACGAA CCGGAAAAAT
AGTCTGCGGG CCACCTATAC CGCTCAGGAA ATGCATATTG CTCCCCGGGA TGCCTCACAA
CAATGGTCAT TCGGATTAAC AGTAAAAGGA GTCGCTGCGG ATGGTCGTCC GCTATACCGG
TCTGCCACAC AGACCGCTGT TAAATTGAAC GATGGTACCG TACAATTTAA CCATGATAAT
CATTATACCG TTGAATACGT TAATAATGAG GACGGTATCC GGCAGAACTT TATCATTCAG
CAACCGGCAG TAAAGGCTCA TACAATCAAT GTACAACTAC AGGCAGCTGA AGGATGGCAG
ATTGCAAAGC GTAATGAGAC CAGTCTGACA TTCAGTAACG GTCAGCAATT GCTTTCCTAT
AATGATCTTA AAGTATGGGA TGCAAAGGGC ACTATTTTAC CGGCTCAATT TTCTGTACAC
AATAACCAGT TCCAGATAGC AGTTGACGTT GAAAAGGCAG TTTATCCTGT TACCATCGAT
CCGATTGTAC TAAATGGTAC CCCACAGAAT GCCAATACCT TTCTGCAAAG CAATCAGTCG
TTCGCATTTC TCGGATATTC TGTATCCAGT GCGGGTGACA TCAATGGCGA TAACTATGAC
GACATCGTTC TAGGCGCTCC GGGATATGAT CATCCCAATG GCGGAAATGG CGCTGCATTT
GTTTACTATG GCAGTAACCG TGGTATTAAT CCGACGAGAT TTTCTATGCT GACCTCCAAC
ATTGTTAGCG GACAGGACGG TACACTTATC GCCGGCGGAG GGGATGTAAA TGATGATGGT
TTTGACGATA TAGTCACTAC TGCTTCTTAT GACAGCACGA TCAACCTGGA TGGTATTTGT
ATCTACTACG GGGCGGCGAG CGGTATTACT ACCACACCTG TAATCATTTA TGGGAACCCT
GCCTATGGAA CGTTCGCAGA TGCGATTACT ATCTCTAAAG ATCTTGACGG AGATTTTATC
GATGATATCG TTGTAGGCTC CGGATACGGC TCCCATGGGC AAACCGGTGA AGGTATTGTA
ACAATCATTC CCGGAAGTCC CTGGGGAGCA GAATATACTG CGTGGACAGT CATTGAAGGT
AATCAGTTAG GTTTGCATCT GGGCAATCAT GTAAAGTCCG CGGGCGATGT AAACGGTGAT
TCCTACAATG ATCTCATCAT TGGCACCGGC AATATGGTCT TAGTCTATTT CGGTGGACCT
GGCGGTCTCG CTACCACACC AGGTAGTTCA CTGACAATTA CCGCAGGATC TATACATCCT
CCCTATGCGC TGGCGGCCGG CGGAGATATT AATGGAGATG GACATACTGA CATTATTGTC
GGCAAAACCG TCTACTCCAA TGGCCAGTCC CAGGAAGGTG CTGTATGGGT ATATTATGGT
AATGCCACGG GCATCGACAC CATTCCGGCT ACTATCCTGG AAGGAAACGC AGATTCTATT
TCCTACGGTG TATCAGTCGC CTTTGCCGGA GATATCAATA ACGATGGATT TAGCGATATC
GTAGTGGGAG CATTAGGCCA GAGCAATGAT ATCAACCAGA AAGGGGAAGG TATGGCCTAC
GTTTATTATG GTAGAGCCAC CGGTCTTAAT CCTGTACCTG CATCAACCAT ACAATCCAAC
CAGAAAGACG CGTTACTCGG CATCAGTGTT GCTGGCGCAG GCGATGTTAA CGGCGATGGG
TACAGTGATG TAGTGATTGG CGCTATGCTG TATACAAACG GGCAGGAAGC GGAAGGTGCA
GCATTTGTTT ATCACGGTGG CGCAGGCTCC GCAGGATTGC TCGCGGCAAC AACAGCCGGT
AAGATGACGG CATCTCCTGC AGATCCCTTT TCCGCTGTAA AAGTATTTCC TAATCCGACA
GTTAACAACC TCTCTGTTCA GCTGCAGGGT TTAGACAGCC AGCTACCTAC TGAAATACAG
ATCATGAATC TACAAGGTAG AATAGTGCAG GTAGTGAAAG CGGGGAATAT AGACAGTTAT
CAGCAGTCAG TTGACCTTAG CAGACTGACA GCTGGCATAT ACTTTGTGGT GATCCGGAAC
GGCAGCAAGG TGTTCCGGGA AAAGATAATT AAGCAATAA
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| Protein sequence | MKKLYLLGSM LLAVCSAHAN TDPIIEKGTL DQIQTQLARS EYFIHWQNYA GIYQSTNRKN
SLRATYTAQE MHIAPRDASQ QWSFGLTVKG VAADGRPLYR SATQTAVKLN DGTVQFNHDN
HYTVEYVNNE DGIRQNFIIQ QPAVKAHTIN VQLQAAEGWQ IAKRNETSLT FSNGQQLLSY
NDLKVWDAKG TILPAQFSVH NNQFQIAVDV EKAVYPVTID PIVLNGTPQN ANTFLQSNQS
FAFLGYSVSS AGDINGDNYD DIVLGAPGYD HPNGGNGAAF VYYGSNRGIN PTRFSMLTSN
IVSGQDGTLI AGGGDVNDDG FDDIVTTASY DSTINLDGIC IYYGAASGIT TTPVIIYGNP
AYGTFADAIT ISKDLDGDFI DDIVVGSGYG SHGQTGEGIV TIIPGSPWGA EYTAWTVIEG
NQLGLHLGNH VKSAGDVNGD SYNDLIIGTG NMVLVYFGGP GGLATTPGSS LTITAGSIHP
PYALAAGGDI NGDGHTDIIV GKTVYSNGQS QEGAVWVYYG NATGIDTIPA TILEGNADSI
SYGVSVAFAG DINNDGFSDI VVGALGQSND INQKGEGMAY VYYGRATGLN PVPASTIQSN
QKDALLGISV AGAGDVNGDG YSDVVIGAML YTNGQEAEGA AFVYHGGAGS AGLLAATTAG
KMTASPADPF SAVKVFPNPT VNNLSVQLQG LDSQLPTEIQ IMNLQGRIVQ VVKAGNIDSY
QQSVDLSRLT AGIYFVVIRN GSKVFREKII KQ
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