Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4196 |
Symbol | |
ID | 8360369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5244089 |
End bp | 5246347 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966365 |
Product | FG-GAP repeat protein |
Protein accession | YP_003123854 |
Protein GI | 256423201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000719971 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.263746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TCTACCTGCT TGGCAGTATG CTGCTTGCTG TCTGCTCCGC ACATGCAAAC ACAGACCCTA TCATTGAAAA AGGTACGCTT GACCAGATCC AGACACAACT CGCGCGTAGC GAATATTTTA TCCACTGGCA AAATTACGCG GGCATCTACC AGAGTACGAA CCGGAAAAAT AGTCTGCGGG CCACCTATAC CGCTCAGGAA ATGCATATTG CTCCCCGGGA TGCCTCACAA CAATGGTCAT TCGGATTAAC AGTAAAAGGA GTCGCTGCGG ATGGTCGTCC GCTATACCGG TCTGCCACAC AGACCGCTGT TAAATTGAAC GATGGTACCG TACAATTTAA CCATGATAAT CATTATACCG TTGAATACGT TAATAATGAG GACGGTATCC GGCAGAACTT TATCATTCAG CAACCGGCAG TAAAGGCTCA TACAATCAAT GTACAACTAC AGGCAGCTGA AGGATGGCAG ATTGCAAAGC GTAATGAGAC CAGTCTGACA TTCAGTAACG GTCAGCAATT GCTTTCCTAT AATGATCTTA AAGTATGGGA TGCAAAGGGC ACTATTTTAC CGGCTCAATT TTCTGTACAC AATAACCAGT TCCAGATAGC AGTTGACGTT GAAAAGGCAG TTTATCCTGT TACCATCGAT CCGATTGTAC TAAATGGTAC CCCACAGAAT GCCAATACCT TTCTGCAAAG CAATCAGTCG TTCGCATTTC TCGGATATTC TGTATCCAGT GCGGGTGACA TCAATGGCGA TAACTATGAC GACATCGTTC TAGGCGCTCC GGGATATGAT CATCCCAATG GCGGAAATGG CGCTGCATTT GTTTACTATG GCAGTAACCG TGGTATTAAT CCGACGAGAT TTTCTATGCT GACCTCCAAC ATTGTTAGCG GACAGGACGG TACACTTATC GCCGGCGGAG GGGATGTAAA TGATGATGGT TTTGACGATA TAGTCACTAC TGCTTCTTAT GACAGCACGA TCAACCTGGA TGGTATTTGT ATCTACTACG GGGCGGCGAG CGGTATTACT ACCACACCTG TAATCATTTA TGGGAACCCT GCCTATGGAA CGTTCGCAGA TGCGATTACT ATCTCTAAAG ATCTTGACGG AGATTTTATC GATGATATCG TTGTAGGCTC CGGATACGGC TCCCATGGGC AAACCGGTGA AGGTATTGTA ACAATCATTC CCGGAAGTCC CTGGGGAGCA GAATATACTG CGTGGACAGT CATTGAAGGT AATCAGTTAG GTTTGCATCT GGGCAATCAT GTAAAGTCCG CGGGCGATGT AAACGGTGAT TCCTACAATG ATCTCATCAT TGGCACCGGC AATATGGTCT TAGTCTATTT CGGTGGACCT GGCGGTCTCG CTACCACACC AGGTAGTTCA CTGACAATTA CCGCAGGATC TATACATCCT CCCTATGCGC TGGCGGCCGG CGGAGATATT AATGGAGATG GACATACTGA CATTATTGTC GGCAAAACCG TCTACTCCAA TGGCCAGTCC CAGGAAGGTG CTGTATGGGT ATATTATGGT AATGCCACGG GCATCGACAC CATTCCGGCT ACTATCCTGG AAGGAAACGC AGATTCTATT TCCTACGGTG TATCAGTCGC CTTTGCCGGA GATATCAATA ACGATGGATT TAGCGATATC GTAGTGGGAG CATTAGGCCA GAGCAATGAT ATCAACCAGA AAGGGGAAGG TATGGCCTAC GTTTATTATG GTAGAGCCAC CGGTCTTAAT CCTGTACCTG CATCAACCAT ACAATCCAAC CAGAAAGACG CGTTACTCGG CATCAGTGTT GCTGGCGCAG GCGATGTTAA CGGCGATGGG TACAGTGATG TAGTGATTGG CGCTATGCTG TATACAAACG GGCAGGAAGC GGAAGGTGCA GCATTTGTTT ATCACGGTGG CGCAGGCTCC GCAGGATTGC TCGCGGCAAC AACAGCCGGT AAGATGACGG CATCTCCTGC AGATCCCTTT TCCGCTGTAA AAGTATTTCC TAATCCGACA GTTAACAACC TCTCTGTTCA GCTGCAGGGT TTAGACAGCC AGCTACCTAC TGAAATACAG ATCATGAATC TACAAGGTAG AATAGTGCAG GTAGTGAAAG CGGGGAATAT AGACAGTTAT CAGCAGTCAG TTGACCTTAG CAGACTGACA GCTGGCATAT ACTTTGTGGT GATCCGGAAC GGCAGCAAGG TGTTCCGGGA AAAGATAATT AAGCAATAA
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Protein sequence | MKKLYLLGSM LLAVCSAHAN TDPIIEKGTL DQIQTQLARS EYFIHWQNYA GIYQSTNRKN SLRATYTAQE MHIAPRDASQ QWSFGLTVKG VAADGRPLYR SATQTAVKLN DGTVQFNHDN HYTVEYVNNE DGIRQNFIIQ QPAVKAHTIN VQLQAAEGWQ IAKRNETSLT FSNGQQLLSY NDLKVWDAKG TILPAQFSVH NNQFQIAVDV EKAVYPVTID PIVLNGTPQN ANTFLQSNQS FAFLGYSVSS AGDINGDNYD DIVLGAPGYD HPNGGNGAAF VYYGSNRGIN PTRFSMLTSN IVSGQDGTLI AGGGDVNDDG FDDIVTTASY DSTINLDGIC IYYGAASGIT TTPVIIYGNP AYGTFADAIT ISKDLDGDFI DDIVVGSGYG SHGQTGEGIV TIIPGSPWGA EYTAWTVIEG NQLGLHLGNH VKSAGDVNGD SYNDLIIGTG NMVLVYFGGP GGLATTPGSS LTITAGSIHP PYALAAGGDI NGDGHTDIIV GKTVYSNGQS QEGAVWVYYG NATGIDTIPA TILEGNADSI SYGVSVAFAG DINNDGFSDI VVGALGQSND INQKGEGMAY VYYGRATGLN PVPASTIQSN QKDALLGISV AGAGDVNGDG YSDVVIGAML YTNGQEAEGA AFVYHGGAGS AGLLAATTAG KMTASPADPF SAVKVFPNPT VNNLSVQLQG LDSQLPTEIQ IMNLQGRIVQ VVKAGNIDSY QQSVDLSRLT AGIYFVVIRN GSKVFREKII KQ
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