Gene Cpin_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4193 
Symbol 
ID8360366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5240504 
End bp5240965 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID644966362 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003123851 
Protein GI256423198 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.209273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.029563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC TAAATAAACA GGAACTTGAG CTGCTGAGGA TATTGCAGAA AAATGCAAAA 
TTCGACATAG GAGACCTTAC GACACGTTTA AACATGTCGC GCAGTGCGAT TTACGACAAG
ATCAAGAAAC TCGAAAATGA GGGCTATATA AAGGAATATG TAGCAATTGT GGATCCCAGG
AAGGTAGGAC TGAATTTCTC CGTTATTATA TCGGTCTCTT TAAACAGTCA GCGCCTCGAT
TATGTCCAGG AATTCTCAAG ACAGGTCACT GCCCTGGAAG AGGTAGCGGA CGCATATGTA
ACCGGGGGCA TCTTTGATTA TATCCTGCGG GTGGTGGTAA AAGACCTGGA CGCCTTTAAC
GAGTTTATCA CAACTAAACT GGCGGTCATT CCCAATGTCA GCAAAATCCA GAGTTCTTTT
GTGATTACCA ATATCAAACA GTCCACCGCT CTTCATTTTT AA
 
Protein sequence
MEQLNKQELE LLRILQKNAK FDIGDLTTRL NMSRSAIYDK IKKLENEGYI KEYVAIVDPR 
KVGLNFSVII SVSLNSQRLD YVQEFSRQVT ALEEVADAYV TGGIFDYILR VVVKDLDAFN
EFITTKLAVI PNVSKIQSSF VITNIKQSTA LHF