Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4193 |
Symbol | |
ID | 8360366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5240504 |
End bp | 5240965 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644966362 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003123851 |
Protein GI | 256423198 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.209273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.029563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC TAAATAAACA GGAACTTGAG CTGCTGAGGA TATTGCAGAA AAATGCAAAA TTCGACATAG GAGACCTTAC GACACGTTTA AACATGTCGC GCAGTGCGAT TTACGACAAG ATCAAGAAAC TCGAAAATGA GGGCTATATA AAGGAATATG TAGCAATTGT GGATCCCAGG AAGGTAGGAC TGAATTTCTC CGTTATTATA TCGGTCTCTT TAAACAGTCA GCGCCTCGAT TATGTCCAGG AATTCTCAAG ACAGGTCACT GCCCTGGAAG AGGTAGCGGA CGCATATGTA ACCGGGGGCA TCTTTGATTA TATCCTGCGG GTGGTGGTAA AAGACCTGGA CGCCTTTAAC GAGTTTATCA CAACTAAACT GGCGGTCATT CCCAATGTCA GCAAAATCCA GAGTTCTTTT GTGATTACCA ATATCAAACA GTCCACCGCT CTTCATTTTT AA
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Protein sequence | MEQLNKQELE LLRILQKNAK FDIGDLTTRL NMSRSAIYDK IKKLENEGYI KEYVAIVDPR KVGLNFSVII SVSLNSQRLD YVQEFSRQVT ALEEVADAYV TGGIFDYILR VVVKDLDAFN EFITTKLAVI PNVSKIQSSF VITNIKQSTA LHF
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