| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4172 |
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| Symbol | |
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| ID | 8360345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5212875 |
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| End bp | 5215025 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966341 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003123830 |
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| Protein GI | 256423177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0175676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAT TTGCTTTACT CTCAGAACCG ATACGCCGGT ATATCAATGA CAAACGATGG
GGAGCCTTCC GACCGATACA GTCCGCCGCT ATTAAGCGGA TCCTGGGTAC GGAAGACAAT
TATATACTCG TATCCAGAAC AGCTTCCGGC AAAACGGAAG CCGCCTTTCT GCCTATTCTC
TCCAAAGTGG ATTTTAAAGA GCCGGGTGTA CAGGTGCTGT ATGTCTCCCC GTTGATCGCA
TTGATCAACG ACCAGTTTGT GCGTGTGGAA GACCTTTGCC GCTATATAGA CGTCAGTATC
ACCAGGTGGC ACGGAGAGGC CAATCAGGCG GCTAAAAAGA AGCTGTTGAA ACAACCGGAA
GGGGTTTTAC TGATAACGCC GGAGTCGATA GAATCTCTTT TCACCAATCA CCCGGAACAT
GCCAGAGCGC TGTTCTCTCG TTTGAAGTTC ATTGTAATAG ACGAGATCCA TACTTTCCTG
GGTAGCGACA GAGGGATGCA CCTGCGTTCA TTATTGTCCA GGATCAATGA TCTTGCTGCT
GACAAGAAGC CGCGTATTGT GGGGCTTTCG GCGACGGTAG GCGACTATGA GGAGCCTAAA
CGTTTTACCG GCGATCCTGC TCATACAAAG GTCCTGATCG ATCCTACAGC AAAGGGAATT
AATGCCCGTT TCAAGTACTT CAAACAGGAG GACGAATACA CTCCGCAGTT CATCGAAGAA
CTGTATAACC AGGTAAAAGA CAGTAAAGTA CTCATCTTCC CCAATACCCG TGGGAATGCG
GAGGAAATAG CCGTGAAGCT CAAACGGGTG TCCGAAAGGA AGAAAGGACA CCCTTATTTC
TTTTCACACC ATTCGGCGGT CGACAAGGAA CTAAGGGAAT ATGTGGAAGA TTTTGCCAAA
ACCAACAAGC GTAATAACTT CTGTATTGCC TGTACCTCTA CGCTGGAACT GGGTATCGAT
ATCGGTACCG TAGAAACCGT GATACAGGTA GACGCAACTC ATTCCATCGC TTCTCTTATT
CAGCGCGTAG GACGTAGCGG CAGAAGAGAA GGACACGAAA GCCAGCTGTT ATTATACGCA
ACAGAACATT GGTCTACCTT ACAGTCATTT GCCTGCTGGG AGCTGTTCAA AGAACAGTTC
GTTGAACCGG TTTACAGTCA GGAAAAGCCA TATGACTTAA TGTTTCATCA GACATTATCC
ATCCTGAAAG AGACAAATGG TTTAGGCAGA CAGGCGCTGT TGCAAAGGCT GCAAAATAAT
CCTGTATTCA GCCGTTTCAG CGCCGCTGAG ATAGATTCCC TGCTGGATTA TATGATTAAG
TCGGAATATA TAGAAGACCT GCGCAGGGAA TTGATTGTAG GGGCTGAAGG AGAAAAGCTG
ACGACTTCCC GGGACTTTTA CTCCATGTTT ATGTCCGCAG TCATGCTGAA GGTGATTCAT
GCAGGCGTCA CTATCGGGGA ACTGGAATTA ACACCCTGGC TGGAGGTAAA CGACAACATC
TTACTGTCGG CTAAAATCTG GAAGATTGCC GATATTGACC TGAAGGCAAA GAAGATATTC
GTCATCCCTG CCAATGACGG CAAGAAACCG GTATTTACCA GCGGTAGCGG AGATGTACAT
CCCCGTATCA GACAGAAAAT GATGGAATTG CTGAATGCTG ATTTAAACAG GGATGAAGCA
GATGATAGTG CGATTGACAG TGTTAATGAA ATCAAACTGT TATTTAAGGA CTTCAGACTG
GATCATCTGT CTGCCGTGCG GCCGGCGATC GTAAAGCATA AGGAGATAGA TATCTATACC
TTTACAGGAA CTAAGATCAA TGAAACCTTA TTCTTCCTTA TCAAAACACT GCATATCGCG
GCTGAACTGG AGGACAGAAA AAGCAGGCTC AGGGTGTTTG ATAACAGTAT CAATCTGAAC
GAGCTGGTTG CTAATCTGCG GCATCAGTTA TTGAACATAA AGATGCATGT AAGCACCCTG
TTTGAAAATG GGGAAGATGG CTTCCGGTTA AGCAAATGGG CCGTTTATCT GCCTGTTGAG
TTAAAGGTGG AATATGTATT GCAAAACAGC TTTGACATCC CCGGGACTAC CGCATTCCTG
GAAGGACTGC AACTGGCGAC ACCGATCCTG GCGGAGACTA TTGTTAAATA A
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| Protein sequence | MSEFALLSEP IRRYINDKRW GAFRPIQSAA IKRILGTEDN YILVSRTASG KTEAAFLPIL
SKVDFKEPGV QVLYVSPLIA LINDQFVRVE DLCRYIDVSI TRWHGEANQA AKKKLLKQPE
GVLLITPESI ESLFTNHPEH ARALFSRLKF IVIDEIHTFL GSDRGMHLRS LLSRINDLAA
DKKPRIVGLS ATVGDYEEPK RFTGDPAHTK VLIDPTAKGI NARFKYFKQE DEYTPQFIEE
LYNQVKDSKV LIFPNTRGNA EEIAVKLKRV SERKKGHPYF FSHHSAVDKE LREYVEDFAK
TNKRNNFCIA CTSTLELGID IGTVETVIQV DATHSIASLI QRVGRSGRRE GHESQLLLYA
TEHWSTLQSF ACWELFKEQF VEPVYSQEKP YDLMFHQTLS ILKETNGLGR QALLQRLQNN
PVFSRFSAAE IDSLLDYMIK SEYIEDLRRE LIVGAEGEKL TTSRDFYSMF MSAVMLKVIH
AGVTIGELEL TPWLEVNDNI LLSAKIWKIA DIDLKAKKIF VIPANDGKKP VFTSGSGDVH
PRIRQKMMEL LNADLNRDEA DDSAIDSVNE IKLLFKDFRL DHLSAVRPAI VKHKEIDIYT
FTGTKINETL FFLIKTLHIA AELEDRKSRL RVFDNSINLN ELVANLRHQL LNIKMHVSTL
FENGEDGFRL SKWAVYLPVE LKVEYVLQNS FDIPGTTAFL EGLQLATPIL AETIVK
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