Gene Cpin_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4148 
Symbol 
ID8360321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5175389 
End bp5175793 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID644966319 
Producthypothetical protein 
Protein accessionYP_003123808 
Protein GI256423155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0466486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.255709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTA TCAAAACAAG GAAAGTCCTC CTTTATTTCA TACTGTTTTT ACTGACAATC 
CCATTAGGTC TGGCTACCCG CCGTTATCCC GGTTATTTTC CGTCTATCAT AAGTGTTTAT
GGCGGTGATA TACTGTATGC CACCTGTCTG TTCTTCCTTT TACGCTTTCT CTTCCCGGTT
ACAGAATTAC TGAAAATTGG CATTATCAGC TATCTTGCCT GCATTGCCAT TGAGTTACAA
CAGCTGTATA AAGCCCCGTG GATCGTGGAA CTGAGAAGAA CATTTCCCTT TGGGCTGATA
CTGGGCTATG ATTTTGCCCT CAGCGACTGT GTCTGCTATT TCATAGGTTG CTTACTTGGT
CTGGGTATTG GCTGGTTACT GGAACACCGT AGCTTTGCTC ACTAA
 
Protein sequence
MSPIKTRKVL LYFILFLLTI PLGLATRRYP GYFPSIISVY GGDILYATCL FFLLRFLFPV 
TELLKIGIIS YLACIAIELQ QLYKAPWIVE LRRTFPFGLI LGYDFALSDC VCYFIGCLLG
LGIGWLLEHR SFAH