| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4133 |
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| Symbol | |
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| ID | 8360306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5151177 |
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| End bp | 5153729 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966304 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123793 |
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| Protein GI | 256423140 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.882317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0172602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAT ATCTAATCAT CGTCTCCGGC TTTGTCAGTG TAGGTGTGTA CGGACAGGAT
GCGTCTAACA TACAGAAAGA CACAACTGTG AAGATATTAT CTGAAGTAAC CGTATCTGCC
TCCCGCACCA GGGAAAGCCT GCTCCGTTCT CCCGTGAGCA TTCAGAAAGC TGGTGAACAA
TACTTTCGCA TGTCTGCTGC TCCTTCCTTC TATGACGCGC TTGAACACCT CCAGGGTGTA
CAGCTGATCA CCCCAAGCCT GGGTTTTAAA GTGCTGAATG CACGTGGCTT CGCCAATACT
ACGAACGTAC GTTTTGCACA ACTCGTAGAT GGAATGGACG TCGCGTCTCC ACATATCGGT
GGCCCTATCG CCAATGCGCT CGGACCCTCT GACCTCGATG TCACTAACGT AGAAATATTA
CCGGGTGTAG CATCCGCGCT TTATGGTATG AATACCGTTA ACGGACTGGC GAATATCTCG
ACTAAAAATC CTTTCACTTC AGAAGGATTA AGCATACAGC AGAAGACAGC CCTGACACAC
CTGAGCGACG CTAACAGCGC AGTAAAAGCC TATACGGAAA CAAGTATCCG ATGGGCAAAG
GTGATTAGTC CGAAGCTGGC TTTTAAGATC AATGGTACCT TTAATCAGGG ATATGACTGG
GTAGCAAATG ATCACCGGGA GCTAAACGGT CAGGCGAATG CAAGTACCGG TCTGCTGGGA
AAAGATAACC CTGCACGGGA TCCTTTAAGT AGTTACGGCA ATGAATCGTC CGACAGAAGA
ACGATCAGCC TTGGTGGCCG CAATTATGTC GTTGCGCGTA CAGGGTATGA CGAAAAAGAC
GTTGTTGATT ATGACCTCCG CAATATCAAA GCCGATGCAG GTATTTATTA TCAGCTGAAA
CCAGGTATGA CCCTGACATA CCTTTATCAT ATAGCCCTCC TGGACAACGT ATACCAGCGC
GCCAACCGCT TCCGCCTGGA AGACTACCTG GTACAGCAAC ATGGTATACA GTTTCAATCA
AGTAGTCTGC AGCTGAAAGT CTACCTGAAC AGAGAAAATA CAGGTAATTC CTATAACCTC
CGTTCCATGG CAGAAAACAT TGATCGTAAT TACAAACCAG ACAATCAATG GTATGCCGAC
TATACCGCAG CTTTCAATAC AGCCACCGGT GCAGGCGCCA CTGTTGCAGA TGCACATAGA
CAGGGCAGGG TAGCAGCAGA TGCAGGTCGT CCTTTACCAG GTACGGAAGC CTTCTCTAAC
AGTCTGACAA AACTCGCACA GATCAATAAC TGGGATATCG GTGCAGCCCT GAAAGTAAAA
GCCAGCTTCA TCCATGCGGA AGGACAGGTA GATCTTACCC AGGACCTGCT GAGCAGTCTG
AAAGAAAAAG CTGGTTTACA GATACTGGTA GGTAGCGATC ACCGGACCTA CATCATTGAG
CCGGATGGTA ACTATTTCAT CAATCCTGAA GCAGGGAAAG AATACACCAA TATTCACTAT
GCAAAAACAG GCGGTTTTGT GTCTGTTACC AAAACATTGC TGAACGGTGA GCTGAAACTG
GGCGCTATCC TGAGAGGTGA TAAAAATGAC TATTTCGACC TGATGATCAC GCCTCGTTTT
ACAGCAGTCT ATTCACCGGT AAACACACAA CATTTCCGGG CCTCTTACCA GAGCGGATAC
CGTTATCCGA GTATCTTCGA AGCCTATTCC AACGTGAACA GCGGTGGAGT GAAACGTGTA
GGTGGTCTGC CTGCTATGTC GCAAGGCATC TTTGAAAAAG CATGGCTGGC ATCGTCTATT
ACCACTTTCC AGCAAGCCGT GCTGACTGAC GTCAACAGCG CCGGACTCAC ACAAAATCAG
GCCATCGAAA AGAATAAAGG ACTGCTGAAG AAAAACCCTT ACACCTACAT CAAAGCCGAA
CACGTAAAAT CTATGGAAAT AGGCTACAAA GGCATTTTTG ACGATGGCAG GTTCTTTATC
GATGCGGAAG CCTACCTGAA TAAGTACAAA AACTTTATCG CACAGGCGAA TATGAATGTG
CCGAATACAG GAGTGGCTGA CTCTATTCCT TATGCCCTCT ATAACAAAAG CAAACAGAGC
CCTTACCGTA TGTGGACCAA TTCACAGACG GAAGTCAATA ACTACGGTGG TAGTCTGGGC
CTGACCTACA CCGAAAAAGG CTATGTCGCC AATGCTAATG TGACCTATGC CAAACTGAAA
ATGTCAGACA AGGAAGACGG ATTGGAAGAT GGTTTTAACA CCCCTTCCTG GACACTGAAT
GTTTCCCTGG CAAAGGAGCG CATATTAAAG CACGCAGGCG CCGGTATTTC CTGGAAATGG
CAGAGTAGCT ATTACTGGCA GTCTTTTCTC GTAAATGGCG ATGTAGATGC TTATTCTACC
GTAGAGGCAC AGGTGACGTA TTTATTTGAC AAGATCAATT GTAAGGCAAA ACTAGGCGCC
AGTAACCTGC TGAATAAGTA TTATTACTCC TTCCTGGGCG GACCATCTAT AGGAGGGATG
TATTACCTGA CAGTGACATA TGGCATACGC TGA
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| Protein sequence | MTRYLIIVSG FVSVGVYGQD ASNIQKDTTV KILSEVTVSA SRTRESLLRS PVSIQKAGEQ
YFRMSAAPSF YDALEHLQGV QLITPSLGFK VLNARGFANT TNVRFAQLVD GMDVASPHIG
GPIANALGPS DLDVTNVEIL PGVASALYGM NTVNGLANIS TKNPFTSEGL SIQQKTALTH
LSDANSAVKA YTETSIRWAK VISPKLAFKI NGTFNQGYDW VANDHRELNG QANASTGLLG
KDNPARDPLS SYGNESSDRR TISLGGRNYV VARTGYDEKD VVDYDLRNIK ADAGIYYQLK
PGMTLTYLYH IALLDNVYQR ANRFRLEDYL VQQHGIQFQS SSLQLKVYLN RENTGNSYNL
RSMAENIDRN YKPDNQWYAD YTAAFNTATG AGATVADAHR QGRVAADAGR PLPGTEAFSN
SLTKLAQINN WDIGAALKVK ASFIHAEGQV DLTQDLLSSL KEKAGLQILV GSDHRTYIIE
PDGNYFINPE AGKEYTNIHY AKTGGFVSVT KTLLNGELKL GAILRGDKND YFDLMITPRF
TAVYSPVNTQ HFRASYQSGY RYPSIFEAYS NVNSGGVKRV GGLPAMSQGI FEKAWLASSI
TTFQQAVLTD VNSAGLTQNQ AIEKNKGLLK KNPYTYIKAE HVKSMEIGYK GIFDDGRFFI
DAEAYLNKYK NFIAQANMNV PNTGVADSIP YALYNKSKQS PYRMWTNSQT EVNNYGGSLG
LTYTEKGYVA NANVTYAKLK MSDKEDGLED GFNTPSWTLN VSLAKERILK HAGAGISWKW
QSSYYWQSFL VNGDVDAYST VEAQVTYLFD KINCKAKLGA SNLLNKYYYS FLGGPSIGGM
YYLTVTYGIR
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