| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4132 |
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| Symbol | |
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| ID | 8360305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5150148 |
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| End bp | 5151047 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966303 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123792 |
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| Protein GI | 256423139 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0973484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA ACGCACACAG GAGTCAGGGA TTTGTTGGAT GTGACGGAGT AAGGATTGAG
AATGGTAATT TTAAGGTACA TGTAGCCAGT AATCAATATA AAACCGCTTC TCCCTATATC
CGCAGGGATT TCTATAAAAT AACGCTATTC AAAGGCATTT CCAGGCTGCA TTATGCAGAT
ACTGGTATTC TCATAGATAA ACCGGCACTG ACATTCTCCA ACCCACTCGT ACCTTATGCA
TGGGAACCCA TCTCAGACCA CTGGAACGGA TACTATTGTC AGTTTACGGA AGAATTCATG
AACATTCATG AACGCAATCA CCTGTCATTC CAGGATTCCC CTTTGTTCAA AATAGGCGGT
AATCCTGTCT GTTTTTTGTC TGAAGAACAG TACGCCAACG TAGAGACGCT TTTCAAAAAA
ATGATTGCTG AAGAGGCCAC AGATTACGTA CATAAATACG AAGTCATCAA GAATTATGTG
AACCTCATTA TTCATGAAGC CTTGCGTATG CAACCGGCAA CGCCTGTCAG CAGGCCGACC
AGTGCAGCCG TACGCATTAC CATGTCCTTC ATGGAGCTCC TGGAAAAACA ATTTCCGGTA
CTGGCGCCTT CGCAGGCACT GGAACTGAAA ACAGCAGGGG ATTATGCTAA AAATCTGGCT
ATTCACGTGA ATCATCTTAA TCACGCAGTG AGAGATGTAA CAGGTAAAGC CACTACCGTA
CATATCCGGG AGCGTATTAT TGCTGAAGCT AAATTATTGC TGAGAAATAC AGACTGGAGT
ATTGCAGATA TCGCTTACGC GTTGGGGTTC GATTATCCTG CTTATTTCAA TAACTTTTTC
AAGAAACAGA CGGGGATGAC TCCCCGTTCT GCCAAATTAG TAACAACAGG AAGTATCTAA
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| Protein sequence | MEANAHRSQG FVGCDGVRIE NGNFKVHVAS NQYKTASPYI RRDFYKITLF KGISRLHYAD
TGILIDKPAL TFSNPLVPYA WEPISDHWNG YYCQFTEEFM NIHERNHLSF QDSPLFKIGG
NPVCFLSEEQ YANVETLFKK MIAEEATDYV HKYEVIKNYV NLIIHEALRM QPATPVSRPT
SAAVRITMSF MELLEKQFPV LAPSQALELK TAGDYAKNLA IHVNHLNHAV RDVTGKATTV
HIRERIIAEA KLLLRNTDWS IADIAYALGF DYPAYFNNFF KKQTGMTPRS AKLVTTGSI
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