| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4108 |
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| Symbol | |
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| ID | 8360281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5113499 |
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| End bp | 5114416 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644966280 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123769 |
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| Protein GI | 256423116 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00405906 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG AGAACATACC GTTTCATATC GCTACTATCA TACAACAAGC GGAACTGACA
GGTATAAGTG CTCCCTTGCA TCCGCTGATA TCGATTTTCA GATTAGAACA TGTACCTGTT
AAGGAGATAG GAGAGACGAT GCGGTTTACC ACCGGATTTT ACTCTATTGC GCTGAAACAT
GGCTGTCCTT GTAAGTTAAA ATATGGTCAG ACAAGCTATG ATTTTAATCA GGGCGTCTTA
TCCTTCTTTG CACCCAATCA GGTACATACG CTGGAAGCAG GTGATGCCAT CGCGCCTGCA
GGCTGGTGTA TGAATATACA TCCGGACTTT ATCCGGAATA CGTCACTGGA TGCAAAGATG
AAACAGTATC ATTTCTTTCA GTACGCGATA AACGAGGCAT TGATCCTGTC AGAACAGGAA
GAAGCGATGA TCAAAGCTAT TTTGCAGGGT ATTGCACAGG AATACCAACA GCCTATCGAT
CGTTTCAGTC AGGATATTAT TATTAATCAG TTGGAGCTGC TACTCAATTA TAGCAATCGT
TTTTACAACA GGCAGTTTAT TACGCGTAAA CCTGCATACA ATGATATACT TGAAAAAGTA
GAACGGGTAT TGAATACATA TTTTGAGCAT GACAAGACAG CTACTGAAGG CTTACCTACT
GTCAGTTATC TTGCAGGACA GCTGCATATG TCATCCAAGT ATCTGAGTGA TACACTGCGT
CAGCTCACCG GACAAAGTGC GCAACAGCAT ATTCATGATT GTCTAATAGA GAAAGCCAAG
GAAGTATTGG CAGGTACACG TCTTTCTATC GGAGAGATTG CCTACCAACT CGGGTTTGCC
TATCCGCAGG CATTCAACAA ACTATTCAGG AATAAAACTG CGATGTCTCC TATGGAATAC
AGACAGCTGT TTAACTGA
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| Protein sequence | MKKENIPFHI ATIIQQAELT GISAPLHPLI SIFRLEHVPV KEIGETMRFT TGFYSIALKH
GCPCKLKYGQ TSYDFNQGVL SFFAPNQVHT LEAGDAIAPA GWCMNIHPDF IRNTSLDAKM
KQYHFFQYAI NEALILSEQE EAMIKAILQG IAQEYQQPID RFSQDIIINQ LELLLNYSNR
FYNRQFITRK PAYNDILEKV ERVLNTYFEH DKTATEGLPT VSYLAGQLHM SSKYLSDTLR
QLTGQSAQQH IHDCLIEKAK EVLAGTRLSI GEIAYQLGFA YPQAFNKLFR NKTAMSPMEY
RQLFN
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