Gene Cpin_4057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4057 
Symbol 
ID8360230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5046495 
End bp5047265 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID644966229 
Producthypothetical protein 
Protein accessionYP_003123718 
Protein GI256423065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.303287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.100752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGT GGTTGTATGA TGGAAGTTTT GATGGCTTCC TTTCTGCGGT ATTTGATCTG 
TACTGGCAGA AGAAGACGGA TGTTACTATC CGGAAGGAAC AGGATCATGT CCAGGGTTTG
TTTGAGAATG TCATCTTTAT GCCGACGATA ATGGCCAATG CTGATAGAGT ATGGATTGGT
TTAAGCAGGA AGTTATCAGA AGAACATCTG CAGCAGTTGT TTTGCTGTTA TCTTTCGGAA
CTGGCTGGAG AAGAGGATCA TATGGTAGGG TTTATACGGC ATGTATTTTC CAGCGAAACA
GATATTTCAG GCGATTTCGG GAATAAATAT ATACTGCATG TAGCACAGAC AGCGCGTAAA
GTGCTGCGTG AAAAACACCG GATGGAGGCC TTTGTGCGCT TTCAGCTGAC AAAGGATAAT
ATCTACTATT CGCTTGTATC TCCGGATTAT AATGTGTTGC CACTGATCGC TAAACATTTT
AAAGAACGAT ATGCAGATCA GTACTGGATT ATCTATGATG AACGCAGGCG GTTTGGGATC
TATTACAATC TTGAAAAAGT AGAGACAATT CGACTGCAGT TTAATACGGA ATATGATCCA
CATTATCATA CAACTGGAAA TGTATGGGCG CCGGAGGAGG AGTTGTATCA GCAGCTCTGG
AATACGTATT TCAAAGAGGC GAATATTGTA GGCAGAAAGA ATCCACGGTT GCAGTTACAG
CATATGCCGC GGAGGTATTG GAAGTATCTG ACAGAGATGC GGTTAGATTG A
 
Protein sequence
MTTWLYDGSF DGFLSAVFDL YWQKKTDVTI RKEQDHVQGL FENVIFMPTI MANADRVWIG 
LSRKLSEEHL QQLFCCYLSE LAGEEDHMVG FIRHVFSSET DISGDFGNKY ILHVAQTARK
VLREKHRMEA FVRFQLTKDN IYYSLVSPDY NVLPLIAKHF KERYADQYWI IYDERRRFGI
YYNLEKVETI RLQFNTEYDP HYHTTGNVWA PEEELYQQLW NTYFKEANIV GRKNPRLQLQ
HMPRRYWKYL TEMRLD