Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4048 |
Symbol | |
ID | 8360221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5035953 |
End bp | 5036723 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644966220 |
Product | fatty acid desaturase |
Protein accession | YP_003123709 |
Protein GI | 256423056 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.295457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0470616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA TTCTGATATT CTTTTTTTCC CACTGGTTCT TATCGTTGTT CTTTCACACC TTTTTCCTGC ATAGATATGC ATCCCACCAG ATGTATACTA CCAGCAAAGG ATGGGAAAGA GTATTCTACT TCTGCACCTG GTTTTTCCAG GGTACCTCTT TCTTAGTGCC GAGAGCGTAT GGTTCAATGC ACCGCATGCA CCATGAGTTC AGCGATACTG AGCATGACCC GCATTCTCCA CACTTCTTTA AAGATGTATG GTCTATGATG TGGCAGACCC GTAAGTTGTA CAACGACATT TATCATAAGA AGGTGGTTCT TGATGAGAAA TTCACTAAAA ACCCTCCTTT ACCGGTATGG GATGCATTAG ATCGTTTCGG CGATTTCACA GCAACTCGTC TGGCATGGGC TGGTATTTAT ATCGCTTTTT ATGTTGCATT CGCTCCAGCC TGGTATTGGT ATCTGCTGTT GCCAATTCAC TTCCTGATCG GACCTGTACA AGGTGCAGTA GTGAACTGGT GCGGTCACAA ATATGGTTAT CAGAACTTTG AGAATGGCGA TAAATCCCGC AATACTTCTC CATGGGGTAT CCTGCTGTTG GGAGAGCTTT TCCAGAACAA CCATCATAAA TTTGGTGAAA GTCCGAATTT TGCAAAGAAA TGGTTTGAAT TTGATCCAAC TTATCCGGTA ATGAAGTTCT TCAACTTCAT CGGTATCATC AAACTGAAGA AAGCCGAAGT GAAAGTGGTT AACATGAAAG CGGCTGCTTA A
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Protein sequence | MTAILIFFFS HWFLSLFFHT FFLHRYASHQ MYTTSKGWER VFYFCTWFFQ GTSFLVPRAY GSMHRMHHEF SDTEHDPHSP HFFKDVWSMM WQTRKLYNDI YHKKVVLDEK FTKNPPLPVW DALDRFGDFT ATRLAWAGIY IAFYVAFAPA WYWYLLLPIH FLIGPVQGAV VNWCGHKYGY QNFENGDKSR NTSPWGILLL GELFQNNHHK FGESPNFAKK WFEFDPTYPV MKFFNFIGII KLKKAEVKVV NMKAAA
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