Gene Cpin_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4047 
Symbol 
ID8360220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5035297 
End bp5035794 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID644966219 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_003123708 
Protein GI256423055 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.298645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0635461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT TCCGTAGTGC GCTATTCCTC GGCCTTCAGC TGGCATTCGT TGTTGCTGCT 
TATGCACAGA CTGGTCCTGT TGTAAAGATC AGTGGAGAGG TGACGAAACC GCTGACATTA
TCCGTAGAGG ATCTGGCTAA AATGAAAAGG ACGACCGCGG TATTTACTGA CAGGGACGGA
AAAGCGCATA GTTACCAGGG AGTCGCTTTG CAGGAATTGC TGGAGCAGGC AGGGGTGACA
ATGGGTAAGC AACTGAGAGG CGAGCAGCTG ACAAAGTACC TGATGGTGAA ATGTGCCGAT
GGATATGAGG TGCTGTTTTC GTTGGCTGAG CTGGACAGCA GTTTTACTGA TAGGGTGGTG
ATACTGGCGG ACAAGCTGGA AAATAGTCCC TTACCCGATG GAAAAGGCCC CTTCAGGTTG
GTGGTGCCAG GAGAGAAGAA ACCAGCCAGA AGCAGCTTTC AGGTGGTAGA AATGGTGATC
CGCTATGCGA AAGATTAA
 
Protein sequence
MKIFRSALFL GLQLAFVVAA YAQTGPVVKI SGEVTKPLTL SVEDLAKMKR TTAVFTDRDG 
KAHSYQGVAL QELLEQAGVT MGKQLRGEQL TKYLMVKCAD GYEVLFSLAE LDSSFTDRVV
ILADKLENSP LPDGKGPFRL VVPGEKKPAR SSFQVVEMVI RYAKD