Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4003 |
Symbol | |
ID | 8360176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4982188 |
End bp | 4982517 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966177 |
Product | small multidrug resistance protein |
Protein accession | YP_003123666 |
Protein GI | 256423013 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000483781 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0171041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGA TCATTCTGAT AATCGGCGGA CTATTCGAAG TAGGATTTAC TTTTAGCTTA GGGAAAGCAA AAGAGGCGAC AGGTAATACG GTATATTTCT GGTATGCCTG TTTTGCGGCC TGTCTGACAT TGAGCATGTA TATGCTGATG AAGGCCACGC AGACCTTGCC CCTGGGTACC GCTTATGCCG TATGGACGGG TATTGGCGCG GTAGGTACCG TATTGGTAGG TATCCTTGTA TTTAAGGAGC CGGCTACCTT TCTGCGTGTA TTGTTCATTA CGACGCTGAT CGGCTCTATT ATCGGCTTAA AAGTGGTTTC ACCGCACTAA
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Protein sequence | MNWIILIIGG LFEVGFTFSL GKAKEATGNT VYFWYACFAA CLTLSMYMLM KATQTLPLGT AYAVWTGIGA VGTVLVGILV FKEPATFLRV LFITTLIGSI IGLKVVSPH
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