Gene Cpin_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3965 
Symbol 
ID8360138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4929795 
End bp4930211 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content44% 
IMG OID644966139 
Producthypothetical protein 
Protein accessionYP_003123628 
Protein GI256422975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0275074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.202471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTGG TGTGTTGTAT GCTGTCAGGC ATCGCATTCG CACAATCCAA AGAAGAAAAA 
GTGGTCGCAG CACAGGTAGA ACTGCTAAGG AAAGCCATGG TAGATGCAGA TAAGGCGACA
CTTGAAAAAG TATCTGATGA AAAATTGTCT TACGGACATT CCAGTGGTAA GATAGAAGAC
AAAACTACTT TCGTCAGCAA TATTGTCAAT GGTAAATCTG ATTTCGTAAC GATCGATCTG
AGTGAACAGA AAATTGTGAT CACCGGCAAT ACCGCTATCG TGCGTCATAC ATTTAGTGCC
GACACGAATG ACGGGGGCGT AGCAGGGCAT GTGAAGCTGT ATATTTTACT GGTGTGGGGC
AAAGATGGTG GGCAATGGAA ACTACTTGCC AGACAAGCAG TTAAAGTTCC TGCCTGA
 
Protein sequence
MLLVCCMLSG IAFAQSKEEK VVAAQVELLR KAMVDADKAT LEKVSDEKLS YGHSSGKIED 
KTTFVSNIVN GKSDFVTIDL SEQKIVITGN TAIVRHTFSA DTNDGGVAGH VKLYILLVWG
KDGGQWKLLA RQAVKVPA