| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3941 |
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| Symbol | |
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| ID | 8360114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4898128 |
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| End bp | 4900140 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966115 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123604 |
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| Protein GI | 256422951 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.783014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.35768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTTACC GTCTTCTTAT ACTTCTTTCC TTTCTGCCGC TATCTCTGTT TGCACAGGAT
AAGGCGAAGC CGGCATCCGC AGCAGCAGTA CCAAAAGATA CTGCTGCTGC CCGGATGCTA
CAGGGCGTTA CCATTTTTTC CAGTAAGAAT AATTCCGTTT CTCCTGTACA GACACTGAGC
GGTGTTGCGC TGGAGAAGAT GAATAGCCTG TCTGTGGCTG ACGCCGTACG CTTCTTTTCA
GGGGTACAGC TGAAAGATTA CGGTGGCTTA GGTGGACTCA AAACCCTGAA CGTACGCAGT
ATGGGAACGA ACCATGTGGG CGTATTTTAT GACGGTATAC AATTGGGCAA CGCGCAGAAC
GGTACCGTGG ATCTGGGGCG TTTTTCGCTG GATAATATAG AACAGATCGA TCTTTATAAT
GCGCAGAAAG GCGCTATTCT TCAACCTGCA AAAGGATTTT CTGCAGCTTC CTCCATTTAT
CTGCAATCCA GGAAACCGAT TTTTCATGAA GGAGAAACCA CGCATGGCAA AGTAGCTATT
AAGACCGGTT CGTTCGGTAT GGTCAACCCC TCGGTACGAC TGGAACAAAA GATCTCCAGT
AACCTGTCAG CAGTTATCAG CAGTGAATGG CTGCATGGCA ATGGCCGGTA TAAATTCAGG
TACACCAATG GTACCTATGA TACGACCGCT GTCAGGGAAA ATGCCGGTAT AGACGCTTCC
CGCGTAGAAG GGGGGCTCTA CGGGCAGTTT AAAGACAGCA GTACCTGGCA CGCGAAAGTT
TATTATTACA ATTCCACCCG CGGACTGCCT GGCGCTATTG TCAGTAATAA GTTCTATAAC
GGGCAACACC AGTGGGACCG CAATCTGTTT GTACAAACCT CCTACAACAA GAAATTCGGC
AAGCGGTATA CCATGTTGTT GAATGCCAAG TATATGTATG ATTATGTACG TTATCTTGAT
ACATCGATCA TTACGGATTA CGGTCCGCTC ATGAACCGCT ATCGCCAGCA TGAATATTAT
ATTTCCTCCG CTAACCAGTA TAAACTGACT TCTTTCTGGG ATGTGGCGCT TTCGGCGGAC
TTTCAGCTGA ATGAAATGAC GGCTGTTAAC CTGGACCATT TCGCGATTCC TACCCGTTAT
ACGACCCTGG CTGCTGCAGC TACGCAATTG CATCTCGGAC AAGTGGAAAT GCAGGGAAAC
CTGTTGGCGA CCTTTATTAA CGAAAAGACA AAGTTATATA GCTCCGGACA TGACTACAGT
GCATTAAGAC CGACGATCCT GGTGTCCTGG CAGCCATTCC GGCTGGAAGA CCTGAAACTG
CGCGCTTTTT ATAAGAGCAT TTTCCGGATG CCGACCTTCA ATGATATGTA CTACAGTACC
GTCGGCAATC CAGATCTGAA ACCGGAGCAT ACCCGGCAAT ATAACGCCGG AATAGGGTAT
ACCCGCAATT CCAAAGGCTT CCTGCAATTC TTCTCCTTAC AGACCGACGT GTATTACAGT
CATGTGAAAG ATAAGATCGT AGCGGCTCCG GGCCGCAACT TTCAGTGGAT GATGCAGAAC
ATTGGCGGCG TGGATATCTA TGGGGCAGAT GCCAGTGTAC AGCTGTCCCC CAGATTGCTG
AATCAGGTAC AAACGGACTT CTCCGTGAAA TATACCTATC AGAAAGCCCT GGATGTGACG
GATCCGCAGG AGGTCAATTA TAAAGACCAG ATCGCCTATG TACCCGTACA CAGCGGTTCC
TTTATTGCAC ACGCTTCCTG GAATAAATGG GATATTAATT ATAGCTTTAT ATATGTCGGG
GAACGTTATT TCCTGAATAC CAATGTACCC TTGTACTACC TGGAACCATG GTATACCAGT
GATCTGTCAG TATCCACCAG CTTTCTCTTT AAGCATAAGC TGATCAAGCT GACGGGAGAA
CTTAACAATG TTTTTAACCA GTATTACGAC GTTGTAATCA ACTACCCGAT GCCGGGGCGT
TATTACCGTC TGACCGCGAG TATAAATTTC TGA
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| Protein sequence | MTYRLLILLS FLPLSLFAQD KAKPASAAAV PKDTAAARML QGVTIFSSKN NSVSPVQTLS
GVALEKMNSL SVADAVRFFS GVQLKDYGGL GGLKTLNVRS MGTNHVGVFY DGIQLGNAQN
GTVDLGRFSL DNIEQIDLYN AQKGAILQPA KGFSAASSIY LQSRKPIFHE GETTHGKVAI
KTGSFGMVNP SVRLEQKISS NLSAVISSEW LHGNGRYKFR YTNGTYDTTA VRENAGIDAS
RVEGGLYGQF KDSSTWHAKV YYYNSTRGLP GAIVSNKFYN GQHQWDRNLF VQTSYNKKFG
KRYTMLLNAK YMYDYVRYLD TSIITDYGPL MNRYRQHEYY ISSANQYKLT SFWDVALSAD
FQLNEMTAVN LDHFAIPTRY TTLAAAATQL HLGQVEMQGN LLATFINEKT KLYSSGHDYS
ALRPTILVSW QPFRLEDLKL RAFYKSIFRM PTFNDMYYST VGNPDLKPEH TRQYNAGIGY
TRNSKGFLQF FSLQTDVYYS HVKDKIVAAP GRNFQWMMQN IGGVDIYGAD ASVQLSPRLL
NQVQTDFSVK YTYQKALDVT DPQEVNYKDQ IAYVPVHSGS FIAHASWNKW DINYSFIYVG
ERYFLNTNVP LYYLEPWYTS DLSVSTSFLF KHKLIKLTGE LNNVFNQYYD VVINYPMPGR
YYRLTASINF
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