| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3930 |
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| Symbol | |
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| ID | 8360103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4877886 |
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| End bp | 4881626 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966104 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123593 |
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| Protein GI | 256422940 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.172533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0169839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGATG GCATCAGCCA GTCAGAGCGC AAACTGGAAG CGCTGCTGCC GTCCTATGTG
AAGATTGATG AACGCAGTCG GGAAGACCTG TTGCTGTTTC TCTCCGAGCT GGCAACGCAA
TTCAACTACT ATAATTTCCA GGATGAGATA GAGGGCGACT GGAGGGAATT CCTCCAGGCC
GATATGCTCA TCATGATTAC GGCTATTTCC CGCCTCGATT TCACCCGCTG GCAGGAAAGA
CAGTCGCGTA TACAGGAAGC CCTGGAATCT GTGAGCGGAG ACGCTAAACT ATATTCACTG
CTGGCAGAAC TGTTTAACCT GATATTTGCA ATTGCCAATC AGCTGGCTGT ACACCTGCAA
CAGCTAAAGA AAGCCGACCA GCAGGCCCTG ACCTGGATCT ATACCGATCA GATCATGGAA
AGTATCGCAG AAGACGTACT GAAAATGCTT CAGTATGAAG AGCAGGCCAT CCTGTTGTTT
ACACCTGCCA CGCATTTCCG TACTATCGCC GTTACTGATG AACTGGCGCT TAACTTTCCT
TCATTAGCCA AAAAGACAAA CAGGGCGCCG GCCGTATTCC TGGGCTACCA GTCCCTGAAT
GAAGTCTACA ATGACCTGCG GACGAAATTC TACCAGGTAA CCAGCGCCGC ACAGTTTTAC
CTGCGCAGAC GTCCCGATTC CCTGCAACAC CATCCGCATA TCGGTATGCT GATGGCGTTT
ACGCAATTAT ACAGTCATTT ACAGGAGAAG CTGAATAAAC TGACCGGACA GCACCAGGAT
TACTACTACC GGAATGTGCT GGGACTGAAA CAGAAACCCG CCATTCCCGA TCAGGTACAT
ATCTTCCTGG ATGCACAACC ACAGAGTATG CCGGTCACTG TCCCCAAGGG AACAGCGATG
GTCGTGGAGA CAGGTGCAGG CGCTGCCCCG GTGACCTACC GGATGGCGCA TGACCTTCGT
GTCAGCCATA CCAGCATCCG CTCACTCAGA AGTGTATACG TCAACAGATA CCGGCAGATA
GCCACGGAAA ATCCGCACCT GTCAGATATT ATGGAAGCGC AGGTCTATAC TGCCACCCAT
GAGGTACCAG CGCCTGCAGC TTATATACCG GGGTCATTGC CGGTAACTTC CTGGCCGATG
CTGGGAGAAC CGCAGCAGGA ATTGCCCCGG GATAAACGTA CCATGGAGGA AACAGAGATG
GGGATGATAC TGGCTTCTCC CTTGTTATAT CTGACAGAAG GGCAACGGAC TGTTGAACTG
GATTTCTACT TCGAACCGGC TTCTTATGAG AAGCTGCTGG CCTACATACA GAACTTCGCA
GCAGTGACCA ATAAGCAGGA AACGCTGGTG ATGAATGAGC TGTTATCGTC CGCATTTGTC
ATTTCTTATA CAACGGCTAC CGGCTGGCAT AAACTGCCGA AACACAGTAT TCGCAGCAGC
AATCGTGCGG GTGGCGCTAA CGCCTTCTTT ATAACCCTCC TGTATGACGT GAATGCACCT
GCAGCTGCAC TTTATGACCC TGTCATACAT GGTGGCGCTT ACCAGAGCAA ACTGCCTTTG
TTACGGCTGA TGCTTAATAA TAACAGTTTC CATCATCCTT ATTCCTACCT GCCGATGTTA
TGGCTGGAAA GGGTGAGCCT CCGCGCACAG GTAAAGGGGT ATCGTTCCGT AAAACTGTTT
AATAACGCCG GGCCATTAAG TCCGGCCAAT CCGTTTCAGC TGTTTGGTCC GCAGCCAACT
ATCGGCTCTT TCCTCGACAT TCGCGACAGC AATGTTTTTA ACGCCTATAC AAAGACTTTT
CGCATCCAGC TGGAATGGCT GGAGCTACCA CATGTAGAAA ACGGTTTTGA CGAGCATTAT
GCCGCTTATA ATGCCGGTAT GACCAACGAC TCTTTTGTAG CCGGTATCAG TGCCTTTGAG
AACGGAGAAA TACATCCGGA GAGAAATCAG CAACAACTAT TACCGCTGTT TAAAACATAC
ACCGACGAAA AAGGAAGGGT TATTCTTTCC GATAAGTCTA CGCTTAAAAA TATCGATCTC
AAAAAAATCC ATTTCCCCAA CCGGCCTTTG ATGGATAAAG AGCCTTTCAT TGCCGACGGG
TTTTATAATG ATGGTGCGAT CAGACTGGAA CTGGCAGGGC CGCAGGACGC TTTCGGACAT
AAGACATACA TGAAGCTCTT CCCTGAAGTG ATGGCCCATA ACGCCAGCAG ATGGGGGCGG
AAGAAGCCTA TCCCGAATAT GCCCTATACG CCGCTGGTAA AGTCTATTTC CATCGACTAT
GTACTGGAAC AGGCCGAGAT CCTGAAGCCG GAAAAAGCAG GTGAAGAAGC GCAGACACTA
CAGATCTTCC ACCTGTATCC TTTTGGTCAC CGGCAGGCAT ATCCATCCTC CTTCCAGGGT
GATTTTACCT TGTTGCCTAC CTTCGAAGAC AGATCCAGTC TGTATATAGG ACTCGACGGT
ATGCAGCCAC AGGAGGAAAT CTCCCTGCTC TTCCAGCTGG AAGAAAAACA TCGCAATCAT
ACACGTATCA ATAAAAAACC CGACCTGCAC TGGAGTTATC TCTACAATGA CCGTTGGGTG
CCTTTCAATA GTTCGCATAT TCTGACAGAT ACGACCCAGT TGTTTCTCAA TAGCGGGGTG
GTAAGTCTGA AGACGCCGCC AATCAATTGT TCAGGTAACA CCAGACTGGA TAAACAGCTC
CAATGGCTGC GACTCTCATC TCCGGAAGAG ATGCAGTTTC GTCCTATGAT AAAGGGACTT
TTCGTGAATG CCGCTATTGC CTGTCGCGAT CAGTCAGATA CCATCGTATC GACTTCATTG
CCTTCTATGT CCATCAAGGC ATTACAGCAT GAATTAAAGG GCATACAGCG CGTATGGCAG
TTGTTCCCTT CCTTTGGCGG CAGACCGGCA GAAACCACAG AGGAATATTA TGTACGCGTC
AGCGAACGGC TACGGCACAA GAACCGTCCG ATGTATGCCA TGGATATTAT TCAGCTGATC
CTGGAGGCAT TCCCGGATAT CCTGATTGTG AAATGCGCGA CAAACATCGC CGCTTCAGAT
ATACAACTGG TAATCGTACC GAAACCATTT AACGGTAAAT ACGAGAATAC AGAGCCACAT
GTAGACATTG TAACACTATA CCGTATTCAT GGTTTCATTG CCAACCTGCT GCCGCCTTTT
ATCAAAGTGA CAGTCCATCA CCCGGTATAT GAAAAAGTGA AGATCGTATG TGATGTACGG
TTTATTGATA AGGCCAGTCT GACGGACAAA AACTACTACC TGACCCAGTT ACAGAATGAT
ATCAGCCGTT ATCTCACCCC CTGGTTGTTT GATACGCATA CGGAAGTGAA GATGGGTGGC
ACGCTGTATA CAGCCGATGT ATTGAGCTAT ATCAAAAAGC TGCCTTATAT CTCTTATGTA
ACCGGTTTCT CTATGGTACA CTTTTTTGAA GAAGACGATC CGAATGGCGA TTATATCCAT
TGTATGCTGG ACACGGCTGT CAGCAATACT GAATATGTCA GGGCATCCAC AGCAGAAGCC
GTACTGATCC CTGCACCACA TCATTCTATC AGTGTGATTG ACGAATGGGG TTACCGCGAA
CCGGAGCCTA TCGGTATCAG CGGTGTGATC ACAGGAGAAG AGATGATCAT CGGACAACAT
GAGCGCAGCA GCTACAAGGA CGACGATGAC TCGCATTATG CAGAAGGAGA AATTATTTCA
CTCACCATAC AATCTAAATA A
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| Protein sequence | MRDGISQSER KLEALLPSYV KIDERSREDL LLFLSELATQ FNYYNFQDEI EGDWREFLQA
DMLIMITAIS RLDFTRWQER QSRIQEALES VSGDAKLYSL LAELFNLIFA IANQLAVHLQ
QLKKADQQAL TWIYTDQIME SIAEDVLKML QYEEQAILLF TPATHFRTIA VTDELALNFP
SLAKKTNRAP AVFLGYQSLN EVYNDLRTKF YQVTSAAQFY LRRRPDSLQH HPHIGMLMAF
TQLYSHLQEK LNKLTGQHQD YYYRNVLGLK QKPAIPDQVH IFLDAQPQSM PVTVPKGTAM
VVETGAGAAP VTYRMAHDLR VSHTSIRSLR SVYVNRYRQI ATENPHLSDI MEAQVYTATH
EVPAPAAYIP GSLPVTSWPM LGEPQQELPR DKRTMEETEM GMILASPLLY LTEGQRTVEL
DFYFEPASYE KLLAYIQNFA AVTNKQETLV MNELLSSAFV ISYTTATGWH KLPKHSIRSS
NRAGGANAFF ITLLYDVNAP AAALYDPVIH GGAYQSKLPL LRLMLNNNSF HHPYSYLPML
WLERVSLRAQ VKGYRSVKLF NNAGPLSPAN PFQLFGPQPT IGSFLDIRDS NVFNAYTKTF
RIQLEWLELP HVENGFDEHY AAYNAGMTND SFVAGISAFE NGEIHPERNQ QQLLPLFKTY
TDEKGRVILS DKSTLKNIDL KKIHFPNRPL MDKEPFIADG FYNDGAIRLE LAGPQDAFGH
KTYMKLFPEV MAHNASRWGR KKPIPNMPYT PLVKSISIDY VLEQAEILKP EKAGEEAQTL
QIFHLYPFGH RQAYPSSFQG DFTLLPTFED RSSLYIGLDG MQPQEEISLL FQLEEKHRNH
TRINKKPDLH WSYLYNDRWV PFNSSHILTD TTQLFLNSGV VSLKTPPINC SGNTRLDKQL
QWLRLSSPEE MQFRPMIKGL FVNAAIACRD QSDTIVSTSL PSMSIKALQH ELKGIQRVWQ
LFPSFGGRPA ETTEEYYVRV SERLRHKNRP MYAMDIIQLI LEAFPDILIV KCATNIAASD
IQLVIVPKPF NGKYENTEPH VDIVTLYRIH GFIANLLPPF IKVTVHHPVY EKVKIVCDVR
FIDKASLTDK NYYLTQLQND ISRYLTPWLF DTHTEVKMGG TLYTADVLSY IKKLPYISYV
TGFSMVHFFE EDDPNGDYIH CMLDTAVSNT EYVRASTAEA VLIPAPHHSI SVIDEWGYRE
PEPIGISGVI TGEEMIIGQH ERSSYKDDDD SHYAEGEIIS LTIQSK
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