| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3926 |
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| Symbol | |
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| ID | 8360099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4874615 |
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| End bp | 4875283 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966100 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123589 |
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| Protein GI | 256422936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000265791 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00532364 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGACAGA TCAAAAAACT GCAGATAGCG GCTTACGCCG ATCCTGCGGG TGTGAACCAA
TTGCTCGGTA CTATCGCCGC AACAATCAAT CCGTCCAGCT ACTCGCTGAG CTATACCGCG
CAGTACGAGT TATCCAAGGA AGACGGTTCC AGCAGCCCTA CCCAGATCTT TAAGGGAATG
GGCCAGTCTG ATTTTAACCT GGATCTCCTG GTAGATGGTA CGGGTATCAT CCCTATTCCG
GATGGTATGT CGGTCGATCG TTATATTGAC CGCCTGAAAT ACCTGATGTT TTCTTACCAG
GGAAATGTAC ACCGGCCCAA TTATCTGAAA ATAAGCTGGG GCAACCTCGT ATACAGGGGT
GTATGCACCA GCTTTACGAC CAACTATAAA CTCTTTAACG CTGATGGTAC TGCCCTGCGG
GCAGAAGTGA AACTGGTAGT CGCCCAGTCA ACAGACTTCA AAGGCAAAAA GCAGAAGGCA
GCCAAACAAT CGCCTGACCT GACGCATATC AGAACCGTGA AAGCCGGCGA TACCCTGCCT
ATGATGGCTT ATCGTATCTA TGGCGATGCT TCCTATTATA TGGAAGTGGC AAGGGTGAAT
GGCCTGAACA GTATTCATGC CATCCGTCCG GGAGATGAGT TGTATTTTCC ACCTTTAAAG
AAAGTATAA
|
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| Protein sequence | MGQIKKLQIA AYADPAGVNQ LLGTIAATIN PSSYSLSYTA QYELSKEDGS SSPTQIFKGM
GQSDFNLDLL VDGTGIIPIP DGMSVDRYID RLKYLMFSYQ GNVHRPNYLK ISWGNLVYRG
VCTSFTTNYK LFNADGTALR AEVKLVVAQS TDFKGKKQKA AKQSPDLTHI RTVKAGDTLP
MMAYRIYGDA SYYMEVARVN GLNSIHAIRP GDELYFPPLK KV
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