Gene Cpin_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3918 
Symbol 
ID8360091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4867457 
End bp4868062 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID644966092 
Producthypothetical protein 
Protein accessionYP_003123581 
Protein GI256422928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00329401 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0168044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA CTTATCATAG CGAGCGCGAA CAATCATCTA CCCGCGCTAA TGCCGCTAAC 
ATGTCTTCAC AAGGTATCCA GCGTAAAGCA GTGGAAGCCC GTCTGAAGAG CGAACCTGTG
CAGCAACAGT CACTTCCGGA AGAAGAAATG CCTGCCCAAC TGGCGGCAAT AGAAGAGGTA
TTACCGGCCC AGATGGCTGC TATTGAGGAT GAATTGCCGG CGCAGATGGC CGCCATGGAT
GAAGAAGAAT TACCGGTTCA GGCTAAATCA GCCGTTCAGC TGAAAGCCAA TCAGACGGGT
ATGCCCGACC AGCTCAAGTC GGGTGTAGAA AGTCTGTCTG GTATAGATAT GTCAGACGTG
AAAGTGCACT ATAACTCCTC CCAGCCCGCA CAGCTGAATG CCCATGCATA TGCACAGGGG
ACGGATATTC ACGTAGCCCC CGGACAGGAA CAGCACCTGC CCCATGAAGC CTGGCATGTT
GTACAACAGA AACAAGGCAG GGTACAGGCC ACTACCCAGT TAAAGGAAAG CGTGCCTGTC
AATGATGATG TTGCGCTCGA AACAGAAGCC GACGTCATGG GACAGAAAAG CCTTCAACAG
GGTTAA
 
Protein sequence
MTQTYHSERE QSSTRANAAN MSSQGIQRKA VEARLKSEPV QQQSLPEEEM PAQLAAIEEV 
LPAQMAAIED ELPAQMAAMD EEELPVQAKS AVQLKANQTG MPDQLKSGVE SLSGIDMSDV
KVHYNSSQPA QLNAHAYAQG TDIHVAPGQE QHLPHEAWHV VQQKQGRVQA TTQLKESVPV
NDDVALETEA DVMGQKSLQQ G