Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3918 |
Symbol | |
ID | 8360091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4867457 |
End bp | 4868062 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644966092 |
Product | hypothetical protein |
Protein accession | YP_003123581 |
Protein GI | 256422928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00329401 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0168044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAA CTTATCATAG CGAGCGCGAA CAATCATCTA CCCGCGCTAA TGCCGCTAAC ATGTCTTCAC AAGGTATCCA GCGTAAAGCA GTGGAAGCCC GTCTGAAGAG CGAACCTGTG CAGCAACAGT CACTTCCGGA AGAAGAAATG CCTGCCCAAC TGGCGGCAAT AGAAGAGGTA TTACCGGCCC AGATGGCTGC TATTGAGGAT GAATTGCCGG CGCAGATGGC CGCCATGGAT GAAGAAGAAT TACCGGTTCA GGCTAAATCA GCCGTTCAGC TGAAAGCCAA TCAGACGGGT ATGCCCGACC AGCTCAAGTC GGGTGTAGAA AGTCTGTCTG GTATAGATAT GTCAGACGTG AAAGTGCACT ATAACTCCTC CCAGCCCGCA CAGCTGAATG CCCATGCATA TGCACAGGGG ACGGATATTC ACGTAGCCCC CGGACAGGAA CAGCACCTGC CCCATGAAGC CTGGCATGTT GTACAACAGA AACAAGGCAG GGTACAGGCC ACTACCCAGT TAAAGGAAAG CGTGCCTGTC AATGATGATG TTGCGCTCGA AACAGAAGCC GACGTCATGG GACAGAAAAG CCTTCAACAG GGTTAA
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Protein sequence | MTQTYHSERE QSSTRANAAN MSSQGIQRKA VEARLKSEPV QQQSLPEEEM PAQLAAIEEV LPAQMAAIED ELPAQMAAMD EEELPVQAKS AVQLKANQTG MPDQLKSGVE SLSGIDMSDV KVHYNSSQPA QLNAHAYAQG TDIHVAPGQE QHLPHEAWHV VQQKQGRVQA TTQLKESVPV NDDVALETEA DVMGQKSLQQ G
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