| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3849 |
|---|
| Symbol | |
|---|
| ID | 8360021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4821176 |
|---|
| End bp | 4821439 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644966022 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003123512 |
|---|
| Protein GI | 256422859 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0299228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.323457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTA ATATAACCTT TGGCGACAAC CTTACCTACC TGCGCCATCT AAGAGGAATA
AGCGTACAGG ATATGGCTGA TATGTTCTGT GTGCACAAAG CAACTTTCCG GTACTGGGAA
AGAGGCAGAA GTTCTCCAGG ATATGAAACG CTTGTAAAAT TATCTGAATA CTTCCAGGTG
AGCGTCGACA ACCTGCTAAA AGTAAGGATC AGAGATAATG CGAAAGCGGC TATTCAATTG
GGTTATCAAC CACTTGATTC ATGA
|
|---|
| Protein sequence | MSVNITFGDN LTYLRHLRGI SVQDMADMFC VHKATFRYWE RGRSSPGYET LVKLSEYFQV
SVDNLLKVRI RDNAKAAIQL GYQPLDS
|
|---|
| |