| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3827 |
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| Symbol | |
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| ID | 8359999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4811695 |
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| End bp | 4812759 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644966000 |
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| Product | integrase family protein |
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| Protein accession | YP_003123490 |
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| Protein GI | 256422837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.730502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.406581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATCA AAAACAAGAT TGAGTCTGTA GTGGCAAAGT ATGTTGCTCA ATGCAAGATA
CTGGAAAAAC CGATTCTTAG ATCTGAGCTG TCTGAACATT TAGACTACGC GCTTAATAAA
AAAGTGAGAT CAACATATGA CTTGTGGGCT GACTGGGATC AGTTTGTCTC TGATATACGG
TCGGGAGTCA TATTAAAAAA GGACGGCACC AGATATAGAG AGGCAAGTGC CAAGCATTAT
GAAAATAGTA AAACAATACT AAAACGCTAT GAGGTGACTA CTGGTAAAGT GATCTCATAT
TCTCTAAATA TGAATGGAGT TAAACATTTT ATCGGATGGA TGGTGACGTT AGGGCAAAGT
AAAAATAGTA TTGCCTGTGT CATCAAAGAT TTAAAGGCGT TTTTCGTAAG GACACACGGG
ATTAAACATA ATAACAAAAT AGCACTTGAT AAAGACTTTT CATATTCTGG AGAGGAAAGT
GATACTATAG CCCTGTCTGA TTCAGAAATA CTTTCACTGT ATAGCCTTGA ATTAACGGGG
TCATTGGAGA AAGCAAGGGA TGTTTTTGTG TTTGGTTGTT GGGTAGCGCT TCGTGTAGGA
GATTTGAGCA GAATTAATGA CTACCATAGG CGAGGTAACC TTATTGAGGT TTTGACTACA
AAGACCAGTG AAAAGGTAAT TATACCACTT CACTGGATGG CAAGAAAAAT CTTAGATAAA
TATGGTGATG GTAACCTTCC TGTATACACT ACTGCAGAAG GTCTTTCTTA TCATCTGAAT
GACTTGTGTA AAATGGCGGG AATAAATAGC AAGCATCTAA TTACAATTAC TAAAGGAGGT
AATCGTATCG CCGAATATTA TGAGAAGTGG CAGTTAGTTT CTCCTCATAC AGCTAGAAGG
TCATTTGCTA CAAATATGTA TAAGGCAGGT TTTCCAGTAA AATCAATTAT GAAAATAACG
GGACATAGGA CAGAAGCTGC GTTTTTCCGT TATATAAGGA TAGATAAAGA ACAGAACGCG
GAGGAATTGG CGGCCAGCCC ATACTTTAAT GGGCCTGCCG CTTGA
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| Protein sequence | MLIKNKIESV VAKYVAQCKI LEKPILRSEL SEHLDYALNK KVRSTYDLWA DWDQFVSDIR
SGVILKKDGT RYREASAKHY ENSKTILKRY EVTTGKVISY SLNMNGVKHF IGWMVTLGQS
KNSIACVIKD LKAFFVRTHG IKHNNKIALD KDFSYSGEES DTIALSDSEI LSLYSLELTG
SLEKARDVFV FGCWVALRVG DLSRINDYHR RGNLIEVLTT KTSEKVIIPL HWMARKILDK
YGDGNLPVYT TAEGLSYHLN DLCKMAGINS KHLITITKGG NRIAEYYEKW QLVSPHTARR
SFATNMYKAG FPVKSIMKIT GHRTEAAFFR YIRIDKEQNA EELAASPYFN GPAA
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