| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3805 |
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| Symbol | |
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| ID | 8359977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4783662 |
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| End bp | 4786067 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965978 |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_003123468 |
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| Protein GI | 256422815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.165252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA TGAAACTCCT GTTTCTTGCA GCTTTCGCAA TGTTTTCGAT GAAAACGTTT
GCACAGCAGT CCTGCTACAA TGTAGTAGGC TATTACCCCT CCTGGGTAGC CGGTGGGAAC
TATTATATCA ATAGTCCTTC GAAAATTGAC TACAGCAAGT ACACGCACAT TTGTTACGCC
TTTTCCATTC CCGACGGGAA CGGAAATATG TCCTCCGTTG ACAATGCCTC CGCATTGAGA
GACCTCGTCA GCCGTGGACA CGCAGCAAAC GTAAAAGTAT TATTATCCGT TGGTGGCTGG
CTGACCTCCT CACCATCCAA CACGCCCTTC GAGGCCATTT CAACAAATAC CACTGCGATC
AACAATTTCG TTAACGCATG TGCCAACATG GTCACCACCT ATAACCTGGA TGGTATCGAT
CTGGATTGGG AATACCCGAC CTCTAAAACC AGGTGGAATG CCGTTGCAGT TCCATTGGGT
AACCGCCTGC ATAGCATGGG CAAACTGTTT ACCGCCGCTG TATCAGAAAG CGGTAACAAC
AACGGTAACA ACTATGACAA CGTCACCATG CTGGACCTCG TCAACATCAT GTGTTACGGT
AACGATGCAC TGGCCAGCAG CGCAATGTCT TACTGGACCT CCCGTGGCGT GCCGCAGAAC
AAAAGAATGC TGGGCGTGCC TTTCTACAGC AGCGACAATA ACAGCGCAGA ACATGTCAGA
AAAGCCAATA TGGCGAAAAC AACCGGCGGT GGTATCATGA TCTGGGATAT CGCATCTGAA
TATGGTGATA TCAACGCGAT CTACAATACA CTCGGTACCA TCTGTAAAGG TGATGTCAAC
CCGGTTCCAC AAAACCTGGC TTCTAACAAA CGCGTGGTGG TATCTTCTAC TGAAGCCAAC
ACTACTACCA GCACTGCAGG CACTAATGCG ACAGACGGTA ATTACAGCAC CCGCTGGTCT
TCCGTTTTCT CCGATCCGCA ATGGTTATAT GTAGACCTGG GCGCCACCTA CAACGTTAAC
AGGGTGAAGA TCACCTGGGA AGCGGCTTAT GCCAGCGCCT ACGATATCCA GATCTCTGCT
GATTCTATCA ACTGGTCTCC GCTGAAATCA ATAACCGGTA ATACCACACT GGTAAACGAT
GTAACCGGAC TCGCAGGTAC AGGCCGTTAC GTACGTATCA ACGGTACAGC CAGAGCAACT
GCCTACGGTT ATTCTATCTA TGAACTGGAA GTATATGGTA ACGCTGCTGC ATCTCAGACG
CCATATGGTG GTTCTAACTG GGCCATTCCT GGTAAAATAG AAGCCGAAAA CTATGACAAT
GGCGGAGAAG GCGTTGCATA TCATGACCTC ACGCCTGCTA ATCAGGGTGG CCAGTATCGC
ACCGCCGAAG CAGTGGACAT CGAAACATGT AACGAAGGTG GTTACAACCT CAGTTATGTG
CAGAACGGTG AATGGTTTGA ATACACTGTA AATGTAAACA CGGCTGGTGT ATACACCCTA
CAGGCCCGGG TAGCCACAAA TGCTGCCGGC AAATCATTCC ATGTAGAACT CGACGGACAA
AACATCTCCG GTCCGATTGC TATTCCTGAT ACAGGCGACT GGCAGACATG GACCACCGTT
AATGTGACGA CGCCTGCCCT CACTACCGGT ACCAAAGTAT TACGCCTCGT AGTGGATGCC
GCTGAATTCA ACATCAACTG GCTCAACTTC ACATTGCAGT CCGACAACAT CGCGGTTAAT
AAAACTGTCA GCGCGTCTTC TATAGAACCT GAAACTGACT TCTCCGCGAT CAAAGCTTTT
GATAGCGATG CAACTACCAC CCGCTGGTCT TCCGCTTATA CAGACAGCGA ATGGATCTCC
GTTGACCTGG GCGCCGTACA AAGCGTCTCA AAGGTGGTGC TCAAATGGGA AAACGCATTT
GCAAGTGCTT ATCGCATAGA AACCTCCCTG GATAACAGTA ACTGGTCTGT ACAGAAAGAA
GTGACAGACG GCGCAGCTGG AACTGCTGCT ATCAGCTTCC CTGCTGTTAA CGCCCGTTAT
GTAAGAATGC ATGGTGTTAA ACGTGGTACG CCATATGGTT ATTCTATCTG GGAATTTGAA
GTATATACTG CTCCGGCTGC CGGCAGACAA AGCATTGCCG CTATCAGTCA GACGAAAGCA
GTAACTGCAA AACCGGCTTT ATTTGCCGTA AATATCTGGC CAAACCCTGC TTCAAATGTA
CTGACTGTAC AAACGAAAGG TGCAGCGCCA CTGGCAGTAG TAAAAGCCTA CAGCATCAAT
GGCAGAGTTG TTTATCAGTC TAAAGTAAAT GGTGCTGACC AGGTACAGGT AAACGTATCC
GGATGGCCTA AAGGCATCTA TGTTATCGAA GTGGGCGATA GCAGAAAGAA AGTGGTGATA
GAATAA
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| Protein sequence | MQKMKLLFLA AFAMFSMKTF AQQSCYNVVG YYPSWVAGGN YYINSPSKID YSKYTHICYA
FSIPDGNGNM SSVDNASALR DLVSRGHAAN VKVLLSVGGW LTSSPSNTPF EAISTNTTAI
NNFVNACANM VTTYNLDGID LDWEYPTSKT RWNAVAVPLG NRLHSMGKLF TAAVSESGNN
NGNNYDNVTM LDLVNIMCYG NDALASSAMS YWTSRGVPQN KRMLGVPFYS SDNNSAEHVR
KANMAKTTGG GIMIWDIASE YGDINAIYNT LGTICKGDVN PVPQNLASNK RVVVSSTEAN
TTTSTAGTNA TDGNYSTRWS SVFSDPQWLY VDLGATYNVN RVKITWEAAY ASAYDIQISA
DSINWSPLKS ITGNTTLVND VTGLAGTGRY VRINGTARAT AYGYSIYELE VYGNAAASQT
PYGGSNWAIP GKIEAENYDN GGEGVAYHDL TPANQGGQYR TAEAVDIETC NEGGYNLSYV
QNGEWFEYTV NVNTAGVYTL QARVATNAAG KSFHVELDGQ NISGPIAIPD TGDWQTWTTV
NVTTPALTTG TKVLRLVVDA AEFNINWLNF TLQSDNIAVN KTVSASSIEP ETDFSAIKAF
DSDATTTRWS SAYTDSEWIS VDLGAVQSVS KVVLKWENAF ASAYRIETSL DNSNWSVQKE
VTDGAAGTAA ISFPAVNARY VRMHGVKRGT PYGYSIWEFE VYTAPAAGRQ SIAAISQTKA
VTAKPALFAV NIWPNPASNV LTVQTKGAAP LAVVKAYSIN GRVVYQSKVN GADQVQVNVS
GWPKGIYVIE VGDSRKKVVI E
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