Gene Cpin_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3782 
Symbol 
ID8359951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4760259 
End bp4760735 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content45% 
IMG OID644965952 
Producthypothetical protein 
Protein accessionYP_003123445 
Protein GI256422792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00124046 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0210619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TTTTCATCCT GGCGTTATGC CTGGCTGGTA CTGCATCATT TGCGCAAAGC 
CGGAATGGTA AAACAGATGG ACAACAGCTT GTGACAGCGA ATAAGAATCC GAACACTACT
GCCGACTATA CAGCGATTAC GGCGGTTATA GATGGATATG TAGAAGGGCT GCGTCTGGGA
GATGTGGCGA AGTTAAAAAA GGCCTTTCAT AAGGATGCGA TCATGTATGG GTTTATGGGC
GTCGGTACCT TGGAAGGAAG TGTCGATAAT TTGTATGACT TCGTTGCGAA ACATGGACCG
GCTGCCGGTG TTACATCCTA TATAAGTATC CTTCACAAGA CAGCGAATAC GGCAATGGTA
CTGGTGGAAC TGGAGGGTGT TTCTTCTACG GAGAATTCTA CGGACTATCT CTCCCTGATG
TATAAGGAGG GGGAATGGAA GATCATTTCG AAGGTTTTTC ATCTCTGGAA AAAGTAA
 
Protein sequence
MRKFFILALC LAGTASFAQS RNGKTDGQQL VTANKNPNTT ADYTAITAVI DGYVEGLRLG 
DVAKLKKAFH KDAIMYGFMG VGTLEGSVDN LYDFVAKHGP AAGVTSYISI LHKTANTAMV
LVELEGVSST ENSTDYLSLM YKEGEWKIIS KVFHLWKK