Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3773 |
Symbol | |
ID | 8359942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4750060 |
End bp | 4750917 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965943 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003123436 |
Protein GI | 256422783 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.653114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0103842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAAAC AACAGAAACA TATCCCGCAA TTCAAGCTCA CCGAAGACGC AAGTACTGGT GTCCTGATTG CCCCCATGCA CGAAGGCATA AAAGCCGGAC ATAACATTAC CGATGCACAC CGGGATGATC ATTACAGCCT GATGTTTGCT TTCACGGGCC ATTACCATTT AAAAATAGAT TTCGAAGACC TTATTGCGAC AGCGCCATTT GTGCTGAAGA TCGCTCCCGG CCAGGTGCAC CAACTTATTA AAAGCAGTGA TCATAGCGGA TGGGTCCTGG CAATAGAAGA GTTTGTGCTG GAACCTGAAT TACAACACTA CCTGCTGACG GGATTATCCC ATCCTATATT ACTACAAGAT GCACATGATT TGCTAACCCG CATTCAAGCG GTCATGAAAC TGGCATTTGA TCTGCAAAGT CATTCCCCTG ATGTATTCAC CCAAAAATCA ATATTATTTC TGGTTCACGC GCTATTCTGT CTGCTGATGT CAGCTGCTGA AAATAAGGAG TTGTCGGATG CAAAAGAAAC CAGGGGGCAT ATCACCGAAC AGGCTTTCCT GCAACTGCTG AAAAAGCATT TTAAAGACTG GAAAAAACCC GGACAATACG CCTCCGCACT ATCTATCACC ACCTCGCACC TGAATGATAT CCTGCGGGAG ACAACAGGAC TTTCTACGTC GATGCATATT CAACATCACA TTATACTGGA AGCCAAAAGG CTGCTGTATT TTACCGATCT GGAAGTTCGG GAAATCGCCT TTAAGCTTGG TTATGATGAT GGGGTTTACT TTGGAAAGCT GTTCAAGAAA GTCACGCACT ATACCTGTTT GGAGTTCCGA AAACAATTCC GCGATTAG
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Protein sequence | MKKQQKHIPQ FKLTEDASTG VLIAPMHEGI KAGHNITDAH RDDHYSLMFA FTGHYHLKID FEDLIATAPF VLKIAPGQVH QLIKSSDHSG WVLAIEEFVL EPELQHYLLT GLSHPILLQD AHDLLTRIQA VMKLAFDLQS HSPDVFTQKS ILFLVHALFC LLMSAAENKE LSDAKETRGH ITEQAFLQLL KKHFKDWKKP GQYASALSIT TSHLNDILRE TTGLSTSMHI QHHIILEAKR LLYFTDLEVR EIAFKLGYDD GVYFGKLFKK VTHYTCLEFR KQFRD
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