| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3771 |
|---|
| Symbol | |
|---|
| ID | 8359940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4748538 |
|---|
| End bp | 4749164 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644965941 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003123434 |
|---|
| Protein GI | 256422781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0679253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTG CAATTATAGG TGCCGGCGCA GGGATCGGCT TAGCCACCGT CATGCAGGCC
TTGCAAAAGG GACATACCGT AGTCGCACTG TCAACCAACG TTACAGCAAT ACCGGATCAT
CCACATCTGA TCACCATAAA AGGGAGTGCC ACGGTTACCG CAGATTTGAA AAAAGTAATG
GAAGGCGCCG ATGCGGTGTT GATCACAGTA GGCACTAAAA ATAAAAAGGC GACCCATTTA
TTTTCAGATA TCGCAAAGGC CGTCGTTCAA CTAACGAATG AATTGGATTT TTCCGCACCG
GTGATCACCA TTACAGGGTT TGGTGCCGGA CAAAGCAAAA GTTACCTTAG CTTTTTTATG
AAAACTGTCA TTCGGCTTTT TCTAAAAGAT CAGTACATCA ATAAAACCCT GATGGAAGAA
ATTTTTGCCT CCAGTAAGGT CAACTGGGAA ATCGTCCGCC CCGGAATGCT GACTAACAAT
GCTTTGACTA CATCCTACAA AGCATTACCC GAACTTAAAA AAGGAATGAA GGTTGGAAAA
ATTTCAAGGG AAGATGTTGC TCATTTTCTG ATAGAGGAAA CTGAAAAACA ACAATATTTA
GGCAAATATG TGGCGCTTTC TTATTAA
|
|---|
| Protein sequence | MRIAIIGAGA GIGLATVMQA LQKGHTVVAL STNVTAIPDH PHLITIKGSA TVTADLKKVM
EGADAVLITV GTKNKKATHL FSDIAKAVVQ LTNELDFSAP VITITGFGAG QSKSYLSFFM
KTVIRLFLKD QYINKTLMEE IFASSKVNWE IVRPGMLTNN ALTTSYKALP ELKKGMKVGK
ISREDVAHFL IEETEKQQYL GKYVALSY
|
|---|
| |