| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3769 |
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| Symbol | |
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| ID | 8359937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4747089 |
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| End bp | 4747700 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965938 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003123432 |
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| Protein GI | 256422779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0472391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA CACTTAGCAT ATCAATTATC GTCATCACCT GTATCATATC CATCACGTCC
TTCAATAACG AACAACGTGT GGCAGATCTC AGTATGTGGC CGTATCTGGT AAAAGAAAAG
AAACAATACT ACCGTTTTAT CACCTCTGGC CTTGTACATG CTAATTTCAT GCACCTGGCC
TTCAATATGT TTACGCTCTT TTTCTTTGGT GGCTTCATCG AACGCCAGTT CGAAGTCATC
TTCCAGAGCA AACTTTATTA TCTGCTGTTC TATATATTAG GGTTAATCCT TTCAGATATT
CCGACTTTCC TCAAACATAG AAACAATCCC GACTACCAGA CGATCGGAGC TTCCGGCGCC
GTTTCTGCGG TGGTATTTGC AGCCATTCTC TTTAACCCCT GGGCGACGAT ATATGTATTT
GTCATCCCAA TGCCTGCTAT CCTTTATGGT GTTGTGTATC TCGGCTATAC GATTTATATG
TCCCGTCAGG AAAGCAACGG TATTAACCAT GACGCACACC TCTGGGGCGC TGTATTCGGC
ATTTTGTTCC CTTTAATCTT TGAACCAAGG ATCGGACAAC TGTTTCTCTA CCAGCTGACG
CATCACTTCT AG
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| Protein sequence | MALTLSISII VITCIISITS FNNEQRVADL SMWPYLVKEK KQYYRFITSG LVHANFMHLA
FNMFTLFFFG GFIERQFEVI FQSKLYYLLF YILGLILSDI PTFLKHRNNP DYQTIGASGA
VSAVVFAAIL FNPWATIYVF VIPMPAILYG VVYLGYTIYM SRQESNGINH DAHLWGAVFG
ILFPLIFEPR IGQLFLYQLT HHF
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