| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3725 |
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| Symbol | |
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| ID | 8359893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4679786 |
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| End bp | 4682542 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965894 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123388 |
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| Protein GI | 256422735 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0163504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0922435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACT ACTTACAACT CGCCTGTTTG TGCGCCCTTT TGTTGCTGAT GAACTTATCT
TCTGTCGTCT ATGGACAACA ACAGCAGACC ATTACAGGTA CGGTAACAGA CAAAACAACA
GGTAATCCCT TACCAGGCGT CACGGTCAGT GTAAAAGGCT CTCTGGCCGG TACTATTACT
GACGGAAGCG GTAATTTCCG GTACAACACC AGCAAGTCGT TTCCGCTGAC GCTTATTTTC
TCCTCCGTTG GTTATACGAA TAATTCAGTG GTGGTTAACA GTGCCGGTAA TATTACGGTA
CAACTCACAT CAACAGAGAT CCTGGGAGAA GAGATCGTTG TAGCAGCCAG CCGCGTTTCT
CAAAGTATAC TGGAATCGCC GGTATCTATT GAGAAGCTGA ACGCCACGGC TATACGCGAG
TCCCCTACCC CTAGTTTCTA TGACGCCTTA CCGTCCCTGA AAGGGGTAGA ATCCAGCGTA
CAGAGTCTCA CTTTCCGTAC CATTACCACC AGGGGTTTCA ATACCAATGG TAACACCCGC
TTTAATCAGC TGATGGATGG TATGGACAAC CAGGCCCCCG GTCTCAACTT CTCTGTAGGT
AACATCGTAG GTATTTCCGA ACTGGACGTA GCCAGCGTAG AATTACTGCC CGGCGCTTCC
TCTGCCCTCT ATGGTGCAGG CGGTATGAAC GGTACCCTGC TGATGACCAG CAAAAGTCCT
TTCGAATACC AGGGACTGAG CCTGAAACTC CAGGGCGGTA TCAACCATGT CGGTAAAAAA
CAGCAGAACT ACATAGGATT CATTCCTGAT GTCACGGCCC GTTATGCAAA GGCTTTCGGA
AAGTTTGCCT TTAAACTGAA CTTTGGTTAT ATGCAGGCTG ACGACTGGCA GGCTATTGAC
TCTACCAATT TCAGCAGACT GAACCTGACC ACAAAACCAG GCTTCTCGCA CGCACAGGAT
CCTAATTACG ACGGTGTCAA CATTTATGGT GACGAGATCA CCAATACCTT TGGTGCAACC
GGCGGATTAC TCAACGGACA GGCCGTTTCC CGTACCGGTT ACAAGGAAAG AGACCTGGTG
GATTATGGTA CGCACAGTTT AAAAACAGGC GCTGCCTTCC ATTACAAAGT CACTGACAAT
ACAGAGGTGA TCCTGCAAGG TAACTGGGGA ACCGGTACAA CGGTTTACAC AGGTTCTGAC
CGTTACTCCC TGCGCAAATT CAACCTGGGA CAATACAAAC TGGAAGTACG CGGCAAACGC
TTCTTCGTTC GTGGTTATAC CACTCAGGAA CGCTCAGGAG AAGCCTATAA CGCAACAGCG
CTGGGTACCA TCCTGAATGA AGCGTACAAT CCAAGCGTTA CAAGAGATGC CAATGGTAAT
ATCAACGGTG GATGGTTTGC GGAATATGCA ACCGTTTATA ACCAGGCAAG AGCCGGTGTT
CTTCCAGGTA ATCCGGGTGC AAAGACCAAT GAAGAAGCGC ACTCCCTTGC AAGACGATTT
GCTGACAGAA ACCGTTTAGC CCCTGGTTCC GCTGCCTTTA ATCAGGCAAA AGAAACCATC
ACCAGCAATT ATATTGGTTT CGGGGCCGGC AGAAACGGTG CGAAATTCAA CGATAAAACA
AACCTCTATC ACTACGAAGG ATTCTATGAC TTCAGCGATC ATATCAAAGT ACTGGAAGTA
CAGGCAGGAG CGTCTTTACG CCGCTATTCC CTGAACTCCG ACGGTACTAT CTTTGACGAT
GCAGACGGCC GTATCAAGAT TGATGAATAT GGGGCCTATC TGCAGGTCGG CAAAAAACTG
GTGAACGACA GGATCAAACT TACCGGATCT ATCCGTTATG ACAAGAATGA GAATTTTGAC
GGCCGCTTTA CGCCACGTTT ATCAGGTGTA TTCACCGTAG CGCCACGTCA TAATATCCGT
CTGTCCTTCC AGACAGCCTA CCGCAATCCT ACCAATCAGG ATCAGTACAT CGATCTGCCT
ATCCGTGCCA ATACACGTCT GATAGGTGGT TTACCAGAAC TGCTGAATAA GTATGACCTG
TATAACAACA AAGGTTATAC GCAAGCCAGC GTACAGCGTT ATGCAGCAAC CGGCGATCCA
AGTCAGTTAC AGCAATATAC TTTCAATAAA TTCAGACCAG AGAGCGTAAG CGCTTATGAA
ATCGGTTATA AGGGGCTTAT CAAAAACCGC TTATTGATCG ACGCTTATTA TTACTACAGC
GCTTATAAAA ACTTCCTCTC TTACGTAGCG CTGATACAGC CTACACAGCC ACTGACACAG
GATCCGGCAC TGAACAGCGC GAGAATTTTC GCTACTTATG TAAACAATCC TGAAACAGTG
AAAGCACAGG GCGGCGCTAT CGGACTGGAC TACCTGATCA ACAGCTGGAC CTTATCCGGT
AACTTCTCTT ATAATGATCT CACCAACAAT GAAAGCGATC TTGATAACAA CTTTAATACG
CCGAAGTATC GCTTCAACAT AGGTGTGGCC AATAAGAACA TTTACAAAAA CTTAGGCTTT
AATGTTATGT ACCGCTGGCA GGATGCCTTC ACCTGGAGCT CCAGCTTCGT GAGAGGTGAT
GTATCTGCCT ATGGCACCAT TGATGCACAG GTTAACTACA GAATTCCGAA GATCAAAGGA
ACAATCAAAG TGGGTGGTTC CAACGTGACC AATCACTACT TCCAGACTTC CTTCGGTAAC
CCGAAAGCTG GTGGTATCTA CTATGTAGCA ATCCTGTTTG ATGATCTGCT GAGATAA
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| Protein sequence | MKNYLQLACL CALLLLMNLS SVVYGQQQQT ITGTVTDKTT GNPLPGVTVS VKGSLAGTIT
DGSGNFRYNT SKSFPLTLIF SSVGYTNNSV VVNSAGNITV QLTSTEILGE EIVVAASRVS
QSILESPVSI EKLNATAIRE SPTPSFYDAL PSLKGVESSV QSLTFRTITT RGFNTNGNTR
FNQLMDGMDN QAPGLNFSVG NIVGISELDV ASVELLPGAS SALYGAGGMN GTLLMTSKSP
FEYQGLSLKL QGGINHVGKK QQNYIGFIPD VTARYAKAFG KFAFKLNFGY MQADDWQAID
STNFSRLNLT TKPGFSHAQD PNYDGVNIYG DEITNTFGAT GGLLNGQAVS RTGYKERDLV
DYGTHSLKTG AAFHYKVTDN TEVILQGNWG TGTTVYTGSD RYSLRKFNLG QYKLEVRGKR
FFVRGYTTQE RSGEAYNATA LGTILNEAYN PSVTRDANGN INGGWFAEYA TVYNQARAGV
LPGNPGAKTN EEAHSLARRF ADRNRLAPGS AAFNQAKETI TSNYIGFGAG RNGAKFNDKT
NLYHYEGFYD FSDHIKVLEV QAGASLRRYS LNSDGTIFDD ADGRIKIDEY GAYLQVGKKL
VNDRIKLTGS IRYDKNENFD GRFTPRLSGV FTVAPRHNIR LSFQTAYRNP TNQDQYIDLP
IRANTRLIGG LPELLNKYDL YNNKGYTQAS VQRYAATGDP SQLQQYTFNK FRPESVSAYE
IGYKGLIKNR LLIDAYYYYS AYKNFLSYVA LIQPTQPLTQ DPALNSARIF ATYVNNPETV
KAQGGAIGLD YLINSWTLSG NFSYNDLTNN ESDLDNNFNT PKYRFNIGVA NKNIYKNLGF
NVMYRWQDAF TWSSSFVRGD VSAYGTIDAQ VNYRIPKIKG TIKVGGSNVT NHYFQTSFGN
PKAGGIYYVA ILFDDLLR
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