Gene Cpin_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3718 
Symbol 
ID8359886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4671766 
End bp4672059 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content44% 
IMG OID644965887 
Productprotein of unknown function DUF77 
Protein accessionYP_003123381 
Protein GI256422728 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.279013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0448299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA AGATCAATTT AGCCTTGCAG ATCCTTCCTT CTGTTCCTAG CGACCAGGTA 
TACGCGGTAG TGGATGAAGC AATAGCAGTG ATACAGGCAT CCGGTCTGAA ATACAGGGTT
TGTCCTTTTG AAACAGTCAT AGAAGGCACT TACGATGAAT GTATGGAAGT GGTCAGAAAA
GCGCAGGAAG TCTGCTTTAA AGCAGGCGCT TCTCAGCTGC TGGTATATGT GAAAATGCAG
ATCAAAAAAG ATGCTGATGT CAGCATAGAA GATAAAACAG GTAAATACGA CTGA
 
Protein sequence
MAHKINLALQ ILPSVPSDQV YAVVDEAIAV IQASGLKYRV CPFETVIEGT YDECMEVVRK 
AQEVCFKAGA SQLLVYVKMQ IKKDADVSIE DKTGKYD