| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3704 |
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| Symbol | |
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| ID | 8359872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4644307 |
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| End bp | 4651311 |
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| Gene Length | 7005 bp |
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| Protein Length | 2334 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965873 |
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| Product | PA14 domain protein |
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| Protein accession | YP_003123367 |
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| Protein GI | 256422714 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4099] Predicted peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.205023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA CTGTACACTT ACTTATCGGC ATTCTGATGC TCTTTGCAGG TACGGCTCAT
GCGCAGCAAG CCTTGAACCC TGCAGACCCC ATTGTTGTGT ACAACTCAGC CTCACCCCCA
ACAGCGCCTG CTTTCGGCCG CATCGGGAAG TGGGTTAAAA CCACCCGTAT GGGCTGGAAT
ACCTCCGATT TCAAATGCTA TATTTACAAG GGACTTAACT TCCGTCTCAA ATTTCCTAAG
ACCTATCAAC ATAATGTTGC TGACGGAAAA AAGTACCCTA TTTTCGTTTT CCTTCATGGC
CGTGGTGAAG GTGGTACCGT TTACGACAAC GAATACCAGC TCCTGCACGG TGGCCAAAAC
TTCGAAACCC AGACGGACAA TGGCAACTTT GACGGATTCC TCTTTTATGG ACAAACTGCT
GATGGAAACT GGGGCAATGG CCAGTTTGAC ATCATTAAAG AATTACTGGA CAGCCTCTCC
ATCCAGGTAA AAGGTGACCT GAACAGAGTG ATCGTAAACG GTCTCTCTGC CGGTGGTTAC
GGGTCCTGGG CTTTCTCAGA ACGCTATCCA CAATACTTCG CTGCTGTAAT GCCAATGAGT
GGTATTGCCA ATGGCGACGC CACAACCGAC AACATTAATA AACTCAAATT TACCTCCTTA
TGGTACTTCC AGGGAGGTTT GGACAATGCA CCCGCTCCTT ACACCGCAAA CACAGTTGTT
ACGGCCTATC AAAACGCCGG AGCAGATCTT AAATACACCC TTTATCCCAA TCTTGGACAT
GGTACCTGGA ACACAGCCTG GGCGGAACCA GACTTTGTGC CATTCATGAA CAGGGCAAAC
GCACTGAATC CATGGCCGCT GACAGGTCGT TCTGAATTCT GTCCCGGTGA AACCTTTAGC
CTGGTAATTG GTATCCCGCC AGGTTTCTCC GCATACGAAT GGCAGAAAGA CGGCAACACC
ATCCCTAACG CTACCGGAAA CAGTATTACC GTTAATTCAC TCGGTACTTA CGCTGTAAGG
GTAAAAAGGA CTGCTAACGG TGCATGGTCA GAGTTCTCCC CTACCCCACT CGTTATTAAA
ACAAAGACGG CTACAGTAAC GCCGCCTATC TCTATAGACA GTCTTGCCAC CAATATACTG
CCAGCTCCGG ATGGCAGCAC CACCGTTACA CTGCAGCTGC CTGCTGGTTA TGCCTCTTAC
GAATGGCGTA CAGTAGGTGG TACCACCAGC CTGGGTAATA CCAACACCCT GACGGTTGGC
GTAGGTCAGT ATATCGCACG TGTGACAGAA CAATTTGGTT GCGCAAGCAG CTTCTCCAGC
CCTTACAAAG TAATTGCTGC AGCTGGTACG AACCTGCCGG ATGCAGTAGG CGGCGCTACT
GTGACTTCTG TTTCACAGAC ACAGCTGACC CTCAACTGGA CAGACAAAGC AAATCCTCAG
AACAATGAAA CTGGTTTTGA AATCTATCGC ACTACTACTC CTGGCAACAA CTATAAGCTG
GTAGGAAAAG TAGCCGCCGA TATATTGGCG TTCAACGACA ATGGATTAGC CTCCAACACA
AAATATTATT ATGTTATCCG TCCTGTAAAT GCCAACGGCG CAGGTCCGGT TTCTACGGAA
GCATCTGGTA CTACCCAGAC CGACGGTGTG AAACCAACTG CTCCGCAAAA CCTGTTAGTG
ACCAACACTA CCACCAGCTC GGTTTCACTT AGCTGGACTG CCGCTACTGA CGATGTAGGC
ATTGCCGGAT ATGATATCTA TGTAAATAAT GCCAAAGCTT ATTCTGTTGA TGGTACACAG
CTCACCATGG TGACCTACGG TCTGACCGAC AGAAAAGTGT ATAACTTCTA TGTAGTAGCC
AAAGATGCGG CGGGGAACCT CTCCGCTCCT AGCAACCAGG TAACTGCTGC TACCGTGAAT
AAAGGTCTTG CCTACAAATA TTACGAAGGC ACTTATTCCA CTCTGCCTAA CTTCAACAAC
CTGACACCGC TTGAAACAGG CAGATCTGCC AATACCGATA TTACAGTAAG AAACAGGGAA
ACCAACTACG CGATCATGTG GACTGGTTTC ATCACCATCC CTGTTTCCGG TACTTACTAC
TTCGGCACCA ACTCTGACGA CGGTAGTAAA CTTTGGGTAA ACATCCCTTA CAGCTACAGC
GGTACTTCTA CTGTAAACAA CGACGGTGCA CACGGTACCA CGCAGGTGAG CAGTGCTGCG
ATCAACCTGA ATGCAGGTGT ATATCCGATC ACTGCCGCTT ACTTCCAGGG CACCGGCGGC
CAGGCAATGA ACATCCGCTG GAGATCAACA GCTCTGAACA TTAATAGCCT TACCAATATT
CCTGATCAGT ATCTGGGCGA TACCCTGACT ATGCCAGGCA ACGCACCTAC TGCACCGGTA
ATATTCGGCG CTACCGCTCC TGCTTTCAAC AAAGTAAATC TGAGCTGGAC TGACAACAGC
AACAACGAAA CAGGCTTCGA ACTGTATCGC AGCGCTACTG CTACCGGTAC TTATTCCGTA
ATAGGAAAAA CGAATGCCAA TGCAACCTCC CTGGTTGATA ATACGGTTGC TGCCAATACC
CGCTACTATT ATAAAGTACG CGCAATAGGT CAATTCGGTG AATCTGCACA GTCCACCGGT
TATCCATGGC TGGCAGTATA TCCCTTCAAC AATGCCGTAT CTGATATCTC CATCAATGCA
AATAATGGTA CTGCGAATGC AATGACCTAC ACGACCACTG ATGAAATAGA AGGTACACAT
GCAGCGGTAT TTAATGGTAC CAGCGCTTAT GTTACCATCG GCGGTAGCTC CAGCGGCTTC
CTGCACGACG CATTCAGCGG TCGCACAGTG TCGATGTGGA TCAAACCGAC AGTAACAGAC
AATAACCGCA TCCTCCTGGA TATGGGTGGC AGCGACAACG GTCTGGCACT GCGTATCAAT
GCCAATAAAC TCGAAGCAGG TATCGCTAAC AATAGCGTCC GTACCCTGAT ATCCACTGCC
TTCACCAGCA CCAACTGGAC ACATGTGGCA CTGGTATTCT CCGGAAGCGG CAGCACCGGT
GTACTCCGCA TGTATCTGAA CGGTGATCTG GCAGGTACCC TGAACACGAA CTACAGTTCG
GTAGGTACAA CGACCAACAA CTCCCGCCTG GGTTCAAACA ATGGTACCAA CGCATTTAAC
TCTACAGGTA CCTTCTACAG GGGTAACATG GATAATGTGG CCATTATCGG TCAGGCACTG
ACACAGGCTG AAATCAGCCA GTTGGCCGCC CAGAATCTGC CATTCTACAG TGTGGTAACA
CCAACACTGC CTGCAGCTCC TGCGGCTCCT TCAAATGTCG CTGCCAATGC AGCCTCTCCA
TCCAGTATCA TACTGAGCTG GACCAATACC AATAACGACG TAAATACCAA AGGCTTCGAC
ATTCAGCGTT CCTTCGGTAC CAGCAATACT TTCGTAACTG TTAAGAGCCT CGATACCGTA
GTTGCCGGCA CTAATAACTA TACGGATACA GCGCTGTATG CAAACCAGCA GTATGTATAC
CGTGTACGTG CGAAAGGCGA CGGTGGTACC TCCGCTTACT CTTCCAACGC CACAGCGACT
ACCGGTAATA ATCGTCCGGT AATCCAGGAT ATCGCTAACC AGTCAGCCCG CTATGATGTG
GAAACACGTA TCCCGGTTGT GGCAACTGAT CCGGATGAAG ATGCGATCAC CCTGTCCGGC
GCTAACCTGC CTTCTTTTGT AACACTTGCT TCCGACGCAC AGGGTTCCTT CCTGAAAGTA
ACACCGAATG TTGGTCTGCA GGGTAGCTAC CCTAACCTGG CAGTGATCGC GACAGACGCA
TTTGGCGGTA AGGACACGGT TACCTTCAAC CTCACCATCA ATGACAATTA CAGCCCTATC
ATAACCTCAA TTGCCAACGT TTCCTTGAAT GAGGGCGACG TTCAGCAGCT ATCGCTTGCA
GCTGCTGATC AGAATGCATC AGACGCGCTC ACATGGTCTG GTGTATCTCT GCCCTCATTC
ATTTCTATCT CCGGTAACAA CCGTTCTGCT ACCCTGAACA TCAATCCTGG TTACGCAGAT
GCAGGTGTGT ACAACGTGAA AGTGGCCATC GTAGACGGTA ATGGCGGTAC TGACAACAAA
ACATTCACCG TTACCATTGC TGATAAGGAT CCGAACTACA AGTTCTTCGT TCGCTTCAAA
CATCAGACAG ACGCACCGGC TCCATGGAAC AACATCACCA CGGTGTCAAC CAGCAACCTG
AAAAATGATA AAGGCGAAAC TACCAATGTT GGTCTGCAGT TACTGACGGG CAACTGGTAC
TCCTGGAACG AAGGTGCTGT TACCGGTAAC AACAGCGGTG TCTACCCTGA CGTAGTACTG
AGAGAATACT ACTTCTTCGG TTCTTACCCT GGTATCTTCA ATTCTGATAA TTCAATCAAC
GGTAAACTGA CTGGTCTCGA CGCCACCAGG AAATACTCTT TCAAATTCTT CGCAGGTAGT
TCCTGGTCTG TACAGGCAAA CAACGGTACT ACAATATTCA CCATGAATGG CGTAAGCAAA
CCGATCGATG TACAGGGTAA TACCACTGTC ACTGCAAACT TTGATAACAT CGCGCCTAAT
GCACAGGGTG AAATCAACTT TAACATGGCA GTTGCCAATG GTACACAGGT AGGTTACCTG
GGCGCTATCG AGGTGAATGC CATCCTGGAC GACGGTACGG TACCTGCTGC GCCTAAAGAC
CTTACCGCTG CAGAAGCAAA TGGTAATGTA TCCCTGAGCT GGACAAACAT CGCTTACAAT
GCTACCGGCT ACAGAGTACA CCGTGCTACA GACAGCCTTG GCACCTACAG CCTGCTGGGC
AGCCTGAATA GCGCAACTGC TAATGCTTAT GTGGACAGCA CCGTGCATGG TAATACTCAC
TATTACTACA AGATCAGTGC TTCCAACTCT GCTGGCGTAT CTACTGGCTA CAGCAACATC
GCAGGTGTGA ATGTTCCGGT TAAACCGCCA CATATCAATG ATATCGCTGA CATTAAACTG
AAAGCTGATG CATCCGCACA GTTCAATGTA CAGGCACAGG GCGATCTGGG TAACACCGTA
ACGCTGACTG TAAGCGGCCT GCCTGCCTTC GGTAACTTTA CCGACAATGG TAATGGCGCC
GGTACCTTCA GCTTCAACCC GACCGCTAAC AACCTGGGTA GCTATGCAGT AACCCTGACA
GCTACAGACA ACCAGGGCGC AGCGTCCAGC AGTACCTTTA ACGTGCTTGT TTCAGACAAG
AATACCAAGA GCATCTACTT CAACTTCTCA TCCAGCAATC CGGCTGCTAC TCCATGGAAC
AATGTGGCAG GATTCCCTTA CGCTGGTACA AGATTTACCA ACGCACTGGA TGAATCAGGT
TTTGCGACCG GTATCAACAT GACATTTGTT GAAAACTGGG AAAATGATGC TACCGCTGCC
GGTATGAGCA CTTATGACAA CTCCGGTATC TATCCGGATA ACGTAATGCG CTCTGCGGTA
TATGACAGCA GAAACATTAC CCATACAGTA AGACTGTCCG GTTTGAACAA TGCGAAACGT
TATAATGTTG TGTTCTTTAG TAGTCTGAAC TTCGGTGTGG CTGCCAAGGC GAGATTCACC
ATCGGCACTG ACAGTGTGGT AATTGATCCG TCATACAATA CCTCTCTGAC TAAACAGATC
AATGGTGTGA CGCCAAATGC CAACGGTGAG ATCAACATCC TGGTGAACAA AACCCAGGCC
GGCTACTACA TGTATATGAA CACACTGGTA CTGGAAGAAT ACGACGCCCT TCAGACACCG
GTTGTGAATC CGCTGAACCT CCGTGCAGGA GCGACCGGCG CGAAATCAAT CAAACTGGAT
TGGGCTGACA GAGCAAACAA CGAAACAGGT TATCAGGTAT GGCGCGCCAT TTCCGGTGGC
AGCTACAGTC TGGTAACTAC ACTCGCAGCA AATACCGTAA CTTACACCGA CAACAACCTG
AGCGTAAACC AGAAATACTA CTATAAAGTA CGCGCTACAA GTCTGCTCGG TAACTCCGAT
TACAGCAACG CAGCTGCGGC GACTACTCCT GGTTTCAGCG TACAGGTGAA CTTCAGTGAA
CTGCTGGTAG CTCCTGCCCC ATGGAACAAC ACAGGTATGC GTCCACAGTC CGGTACAGTG
ATCAGCAACA TGAAGGACGG ACAGAGCAAC ACAACCGGCA TCGGCATCAC CATCCTGGAA
AACTTCGATG GTATGTACTC CGCAGGTGTG AACACCGGCA ATAACAGTGG TGTTTATCCT
GATAACGTAA TGGTTGAAAA CTACGGTCTG TTCCCTGGTA ACCACGCAGA CTTCAACATC
ACCGGACTGA ACCAGACACT GAAATATGAC CTGGTATTCT TCGGTAGCTC AACTGAGTGG
GAAGACATCA CCGGTAAATA CACTGTAAAC GGTACACGGA TGGCATTACT GAATGCTTCT
ATGAACAAGA GCGGTGTAGT AACCATCAGA GATATCTCTC CTGATGCAAA TGGTAAGATT
CACATCGATG TTGATCCAGG TACTGCTACA TCCCGTTACG GTCTGATCGC TGCCCTGACT
ATCAGAGGCC ATATCGATCC GGCTACACAA AATGAAGATG GTCCGGTTGA TCCGCAGGAA
CTGGGTGCAA GACTCACACT CGGCGATAAT ACAGTAGCAG TTTCCGCTCC TGCTGTAGCC
CTGATCAACA AGACCGCTGA CTTCGGAGAC ACTAAGGTTT ATCCGAATCC ATTTGACAAT
CAATTTAACG TTGATATAGT ACTGAAAGCT GAAACAGCAG TAAGAATAGA GATCTTCGAC
ATGGCTGGCC GACTGATGTA CTCAGATTAT AAGGGCTCCG TTCCTGCAGG TAACAGTACC
CTGCGCATTA ATACCGGTTC ACGGATTAGT GCTCCTGGTC TCTACTTGCT CCGCATTAGC
GGTAAGAACG GGGAAACCAA GATGGTTAAA CTGGTAAAGC ATTAA
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| Protein sequence | MKRTVHLLIG ILMLFAGTAH AQQALNPADP IVVYNSASPP TAPAFGRIGK WVKTTRMGWN
TSDFKCYIYK GLNFRLKFPK TYQHNVADGK KYPIFVFLHG RGEGGTVYDN EYQLLHGGQN
FETQTDNGNF DGFLFYGQTA DGNWGNGQFD IIKELLDSLS IQVKGDLNRV IVNGLSAGGY
GSWAFSERYP QYFAAVMPMS GIANGDATTD NINKLKFTSL WYFQGGLDNA PAPYTANTVV
TAYQNAGADL KYTLYPNLGH GTWNTAWAEP DFVPFMNRAN ALNPWPLTGR SEFCPGETFS
LVIGIPPGFS AYEWQKDGNT IPNATGNSIT VNSLGTYAVR VKRTANGAWS EFSPTPLVIK
TKTATVTPPI SIDSLATNIL PAPDGSTTVT LQLPAGYASY EWRTVGGTTS LGNTNTLTVG
VGQYIARVTE QFGCASSFSS PYKVIAAAGT NLPDAVGGAT VTSVSQTQLT LNWTDKANPQ
NNETGFEIYR TTTPGNNYKL VGKVAADILA FNDNGLASNT KYYYVIRPVN ANGAGPVSTE
ASGTTQTDGV KPTAPQNLLV TNTTTSSVSL SWTAATDDVG IAGYDIYVNN AKAYSVDGTQ
LTMVTYGLTD RKVYNFYVVA KDAAGNLSAP SNQVTAATVN KGLAYKYYEG TYSTLPNFNN
LTPLETGRSA NTDITVRNRE TNYAIMWTGF ITIPVSGTYY FGTNSDDGSK LWVNIPYSYS
GTSTVNNDGA HGTTQVSSAA INLNAGVYPI TAAYFQGTGG QAMNIRWRST ALNINSLTNI
PDQYLGDTLT MPGNAPTAPV IFGATAPAFN KVNLSWTDNS NNETGFELYR SATATGTYSV
IGKTNANATS LVDNTVAANT RYYYKVRAIG QFGESAQSTG YPWLAVYPFN NAVSDISINA
NNGTANAMTY TTTDEIEGTH AAVFNGTSAY VTIGGSSSGF LHDAFSGRTV SMWIKPTVTD
NNRILLDMGG SDNGLALRIN ANKLEAGIAN NSVRTLISTA FTSTNWTHVA LVFSGSGSTG
VLRMYLNGDL AGTLNTNYSS VGTTTNNSRL GSNNGTNAFN STGTFYRGNM DNVAIIGQAL
TQAEISQLAA QNLPFYSVVT PTLPAAPAAP SNVAANAASP SSIILSWTNT NNDVNTKGFD
IQRSFGTSNT FVTVKSLDTV VAGTNNYTDT ALYANQQYVY RVRAKGDGGT SAYSSNATAT
TGNNRPVIQD IANQSARYDV ETRIPVVATD PDEDAITLSG ANLPSFVTLA SDAQGSFLKV
TPNVGLQGSY PNLAVIATDA FGGKDTVTFN LTINDNYSPI ITSIANVSLN EGDVQQLSLA
AADQNASDAL TWSGVSLPSF ISISGNNRSA TLNINPGYAD AGVYNVKVAI VDGNGGTDNK
TFTVTIADKD PNYKFFVRFK HQTDAPAPWN NITTVSTSNL KNDKGETTNV GLQLLTGNWY
SWNEGAVTGN NSGVYPDVVL REYYFFGSYP GIFNSDNSIN GKLTGLDATR KYSFKFFAGS
SWSVQANNGT TIFTMNGVSK PIDVQGNTTV TANFDNIAPN AQGEINFNMA VANGTQVGYL
GAIEVNAILD DGTVPAAPKD LTAAEANGNV SLSWTNIAYN ATGYRVHRAT DSLGTYSLLG
SLNSATANAY VDSTVHGNTH YYYKISASNS AGVSTGYSNI AGVNVPVKPP HINDIADIKL
KADASAQFNV QAQGDLGNTV TLTVSGLPAF GNFTDNGNGA GTFSFNPTAN NLGSYAVTLT
ATDNQGAASS STFNVLVSDK NTKSIYFNFS SSNPAATPWN NVAGFPYAGT RFTNALDESG
FATGINMTFV ENWENDATAA GMSTYDNSGI YPDNVMRSAV YDSRNITHTV RLSGLNNAKR
YNVVFFSSLN FGVAAKARFT IGTDSVVIDP SYNTSLTKQI NGVTPNANGE INILVNKTQA
GYYMYMNTLV LEEYDALQTP VVNPLNLRAG ATGAKSIKLD WADRANNETG YQVWRAISGG
SYSLVTTLAA NTVTYTDNNL SVNQKYYYKV RATSLLGNSD YSNAAAATTP GFSVQVNFSE
LLVAPAPWNN TGMRPQSGTV ISNMKDGQSN TTGIGITILE NFDGMYSAGV NTGNNSGVYP
DNVMVENYGL FPGNHADFNI TGLNQTLKYD LVFFGSSTEW EDITGKYTVN GTRMALLNAS
MNKSGVVTIR DISPDANGKI HIDVDPGTAT SRYGLIAALT IRGHIDPATQ NEDGPVDPQE
LGARLTLGDN TVAVSAPAVA LINKTADFGD TKVYPNPFDN QFNVDIVLKA ETAVRIEIFD
MAGRLMYSDY KGSVPAGNST LRINTGSRIS APGLYLLRIS GKNGETKMVK LVKH
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