Gene Cpin_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3702 
Symbol 
ID8359870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4640935 
End bp4642017 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID644965871 
Productacyltransferase 3 
Protein accessionYP_003123365 
Protein GI256422712 
COG category[S] Function unknown 
COG ID[COG4763] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00240595 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.215938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCT TCACTCTTAA GGAATTATTC AACTTTAAAC CTCCCGAAGC CAACCGGCTG 
GGGTGGATTG ACTATGCCAA GGGCATAGCC ATCATCCTGG TCGTATACAG GCATGTTATC
TTCGGACTGA AGAGCAGCGG TGTTATTGTC CCTCAATGGC TCATTGACGG CAATAACATG
TTCTACAGTT TCCGTATGCC ACTGTTTTTC TTTCTCTCCG GGCTGTTCTT CGAAAGAAGC
ATAGCCCGGA AAGGAGAAAC CGGCTTTTTT GTTACCCGTG TCAATACATT GTTGTATCCC
TATCTGCTGT GGGCGTTCAT CCAGATCTCC CTGCAAATAC TTTTCTCATC AGTTGTTAAC
GCCCATCGTA CAGGCGCCGA TTACCTGAAT ATTCTGATAC AACCCCGCCA TCTTGACCAG
TTATGGTATT TATTCGCATT ATTTAATGTA ACCTTACTGT ATCTGCTGGT AGCAAAACTT
TTCCGCTACG ACAAATTCGC CCAGGTGCTT GTTTCCCTGG CGTTGCTGGC CATTGCCCCT
CTTGTAAACA GTATCAGCAC ACTATATGAT ATTGCCTTAC ATTACATCTT TTTCTGTATT
GGTAACCTTA CGGCAAGTTA TTTTTTCGCT GAAAAAACAC AGGATAAACT GTCTTCGGCA
TACGGATTGC TTATACTGCT CCCCGTTTTT GCAGTGTGCC AGTATTATTT CCTGCATCAC
CAGCAAATGA ACCTGTTCCT GTATACAGGA ATAGCGCTGG TAGGGAGTCT TTTTACGATC
ATGCTGTCTT TTCAGTTATC GAAGTATAAA GCAATGCCTA TTCTGAAGAC ATTCGGGCAT
TACTCATTAT ATATCTATCT GCTGCACGTG CCGATTGTTT CGGTGATCAG GTACTTTATG
ATCGCCACCC CTTTGAGGCA GCATATAGTG ATTACCTTGT TACTATTGAT CTTTATCGCA
ATCTTTTTTT CCATCATCGT TTACAGGTTA TGTATGCGGC TCAGACTGGG ATTCCTGTTC
ACAGGTCCCT TCACTGCGCC TCCTTCTAAT CCGCAGACGG TGGCAACACC GAAAACGCCT
TAA
 
Protein sequence
MQSFTLKELF NFKPPEANRL GWIDYAKGIA IILVVYRHVI FGLKSSGVIV PQWLIDGNNM 
FYSFRMPLFF FLSGLFFERS IARKGETGFF VTRVNTLLYP YLLWAFIQIS LQILFSSVVN
AHRTGADYLN ILIQPRHLDQ LWYLFALFNV TLLYLLVAKL FRYDKFAQVL VSLALLAIAP
LVNSISTLYD IALHYIFFCI GNLTASYFFA EKTQDKLSSA YGLLILLPVF AVCQYYFLHH
QQMNLFLYTG IALVGSLFTI MLSFQLSKYK AMPILKTFGH YSLYIYLLHV PIVSVIRYFM
IATPLRQHIV ITLLLLIFIA IFFSIIVYRL CMRLRLGFLF TGPFTAPPSN PQTVATPKTP