Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3688 |
Symbol | |
ID | 8359856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4627521 |
End bp | 4627865 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644965857 |
Product | aspartate alpha-decarboxylase |
Protein accession | YP_003123351 |
Protein GI | 256422698 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0853] Aspartate 1-decarboxylase |
TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.177527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATTG AAGTACTGAA AAGTAAGATC CACCGCGCAG TAATCACTGA AGCAAACCTG CAATACGTAG GAAGCATTAC TATTGATGAA GATCTCATGG ACGCTGCGAA CGTTATTGAA TACGAAAAAG TACAGGTAGT TAACGTGAAC AATGGAGAAC GCCTGGAAAC CTATATCATA AAAGGCAAAC GCGGTTCAGG CGTTGTCTGT ATGAATGGCC CCGCTGCCCG CCTCTGTGCG GTTGGCGATA TAGTGATCAT TATCTCTTAT GCGTCTATGG ACTTTGAGGA GGCTAAAAAA CATACTCCTA TTGCCATATT CCCGAAAGAA AATAATAAAT TGTAA
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Protein sequence | MHIEVLKSKI HRAVITEANL QYVGSITIDE DLMDAANVIE YEKVQVVNVN NGERLETYII KGKRGSGVVC MNGPAARLCA VGDIVIIISY ASMDFEEAKK HTPIAIFPKE NNKL
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