Gene Cpin_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3688 
Symbol 
ID8359856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4627521 
End bp4627865 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content42% 
IMG OID644965857 
Productaspartate alpha-decarboxylase 
Protein accessionYP_003123351 
Protein GI256422698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.177527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTG AAGTACTGAA AAGTAAGATC CACCGCGCAG TAATCACTGA AGCAAACCTG 
CAATACGTAG GAAGCATTAC TATTGATGAA GATCTCATGG ACGCTGCGAA CGTTATTGAA
TACGAAAAAG TACAGGTAGT TAACGTGAAC AATGGAGAAC GCCTGGAAAC CTATATCATA
AAAGGCAAAC GCGGTTCAGG CGTTGTCTGT ATGAATGGCC CCGCTGCCCG CCTCTGTGCG
GTTGGCGATA TAGTGATCAT TATCTCTTAT GCGTCTATGG ACTTTGAGGA GGCTAAAAAA
CATACTCCTA TTGCCATATT CCCGAAAGAA AATAATAAAT TGTAA
 
Protein sequence
MHIEVLKSKI HRAVITEANL QYVGSITIDE DLMDAANVIE YEKVQVVNVN NGERLETYII 
KGKRGSGVVC MNGPAARLCA VGDIVIIISY ASMDFEEAKK HTPIAIFPKE NNKL