Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3682 |
Symbol | |
ID | 8359850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4619277 |
End bp | 4620161 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644965851 |
Product | Os10g0463800; hypothetical protein |
Protein accession | YP_003123345 |
Protein GI | 256422692 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.917875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.205259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGACT ATGTTCTTAG CGGTCTGATG CAACGCTATC AGGAGCGTGT TCCTGACGTT GCCGCTATTA TTGCCGCCAT GATCACTGAG AATCTGATCC AGGTTCCGGA AGACATTGAG AATGACCATA TTGCCTTCCG TACAATAGGG GTACCCGAAC TCGGGATACA GTCACTGGAA AAGATCTTCC TCCACTACGG TTACACCAGA AGAGATGCGT ATCACTTTAA AGCAAAGAAG CTGGACGCAT ACTGGTATGC GCCGCCTGCG CCTCACTTCC CCCGCATTTT CATCAGTGAA TTACGGGTGA AGGATCTCAG TCCGGAAGCA CAGCAGATCA TTACCAGCTA CACCAAAGAA GTACTGGTAG ACCCTGTCAG CAACCTGGAC CTGAACGACG GACCGGCAGT AGATACTTTT CTGCACAGTT CCCTCTGGCG TACGCCTACC CTGGAAGACT ATCAGACACT GGCAGCGGAG AGTGAATATG CGGCATGGGT GATCTATAAC CGTTATTACC TGAACCATTT CACCATCAGT TTACAGAACC TGCCGCCAGG TTATAATACG GTAGCAGATT TCAATAAATT CCTGGAGAAG GAAGGGTTTA CACTCAATGA CTCCGGTGGC AAGATCAAGG AAAGTCCGGA TCACCTGTTA CTGCAAAGCA GTACGGTCGC CAAAATGATT CCGGCTACCT TCGCCAACAA CGAGGTGCAG AAGATCGCCG GTTCCTATGT GGAATTTGCC GAACGCAGGG TACTGCCGCA GTTCGCCCAT CTTCCGGCAG ATCAGGTCAC CCGCGAGCAA CGCAGGGAAG GATTTGAAGC AGGCAATGCA GACCGCATTT TCGAAAGTAC ATACAGCTCA CAAACGAATA AATAA
|
Protein sequence | MLDYVLSGLM QRYQERVPDV AAIIAAMITE NLIQVPEDIE NDHIAFRTIG VPELGIQSLE KIFLHYGYTR RDAYHFKAKK LDAYWYAPPA PHFPRIFISE LRVKDLSPEA QQIITSYTKE VLVDPVSNLD LNDGPAVDTF LHSSLWRTPT LEDYQTLAAE SEYAAWVIYN RYYLNHFTIS LQNLPPGYNT VADFNKFLEK EGFTLNDSGG KIKESPDHLL LQSSTVAKMI PATFANNEVQ KIAGSYVEFA ERRVLPQFAH LPADQVTREQ RREGFEAGNA DRIFESTYSS QTNK
|
| |