Gene Cpin_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3682 
Symbol 
ID8359850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4619277 
End bp4620161 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content50% 
IMG OID644965851 
ProductOs10g0463800; hypothetical protein 
Protein accessionYP_003123345 
Protein GI256422692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.917875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.205259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGACT ATGTTCTTAG CGGTCTGATG CAACGCTATC AGGAGCGTGT TCCTGACGTT 
GCCGCTATTA TTGCCGCCAT GATCACTGAG AATCTGATCC AGGTTCCGGA AGACATTGAG
AATGACCATA TTGCCTTCCG TACAATAGGG GTACCCGAAC TCGGGATACA GTCACTGGAA
AAGATCTTCC TCCACTACGG TTACACCAGA AGAGATGCGT ATCACTTTAA AGCAAAGAAG
CTGGACGCAT ACTGGTATGC GCCGCCTGCG CCTCACTTCC CCCGCATTTT CATCAGTGAA
TTACGGGTGA AGGATCTCAG TCCGGAAGCA CAGCAGATCA TTACCAGCTA CACCAAAGAA
GTACTGGTAG ACCCTGTCAG CAACCTGGAC CTGAACGACG GACCGGCAGT AGATACTTTT
CTGCACAGTT CCCTCTGGCG TACGCCTACC CTGGAAGACT ATCAGACACT GGCAGCGGAG
AGTGAATATG CGGCATGGGT GATCTATAAC CGTTATTACC TGAACCATTT CACCATCAGT
TTACAGAACC TGCCGCCAGG TTATAATACG GTAGCAGATT TCAATAAATT CCTGGAGAAG
GAAGGGTTTA CACTCAATGA CTCCGGTGGC AAGATCAAGG AAAGTCCGGA TCACCTGTTA
CTGCAAAGCA GTACGGTCGC CAAAATGATT CCGGCTACCT TCGCCAACAA CGAGGTGCAG
AAGATCGCCG GTTCCTATGT GGAATTTGCC GAACGCAGGG TACTGCCGCA GTTCGCCCAT
CTTCCGGCAG ATCAGGTCAC CCGCGAGCAA CGCAGGGAAG GATTTGAAGC AGGCAATGCA
GACCGCATTT TCGAAAGTAC ATACAGCTCA CAAACGAATA AATAA
 
Protein sequence
MLDYVLSGLM QRYQERVPDV AAIIAAMITE NLIQVPEDIE NDHIAFRTIG VPELGIQSLE 
KIFLHYGYTR RDAYHFKAKK LDAYWYAPPA PHFPRIFISE LRVKDLSPEA QQIITSYTKE
VLVDPVSNLD LNDGPAVDTF LHSSLWRTPT LEDYQTLAAE SEYAAWVIYN RYYLNHFTIS
LQNLPPGYNT VADFNKFLEK EGFTLNDSGG KIKESPDHLL LQSSTVAKMI PATFANNEVQ
KIAGSYVEFA ERRVLPQFAH LPADQVTREQ RREGFEAGNA DRIFESTYSS QTNK