Gene Cpin_3663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3663 
Symbol 
ID8359830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4598912 
End bp4599349 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content42% 
IMG OID644965832 
ProductSsrA-binding protein 
Protein accessionYP_003123326 
Protein GI256422673 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0818654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC TCAAGAACAG ATCGGCATAT TTCGAGTACG CAATAGAGGA TAAGTATATT 
GCCGGCATGG TGTTGACAGG AACGGAAATT AAATCAATCC GTGGTAGCCG CGTGAGCTTC
AACGATTCAT TCTGCTATTT TTCCAAAGGA GAGTTGTTTG TTAAAAGCCT GCATATATCT
GAATATACAC ACGGCACATA TTCTAATCAT GATCCCCTTC GTGAACGTAA GTTACTGCTG
ACCAAGCGGG AACTTAGAAA ACTTGAGAAC AAGATCAAGG AAAGAGGCTA CAGCATCATT
CCCCTGCGCA TCTTTATTAC CGATAAAAGC CTGGCTAAGA TCGAAATCGG ACTGGGTAAA
GGTAAAAAGC TGCATGACAA ACGAGATAGT ATCAAGCAAC GCGAAACGGA CAGGGAGATC
AGAAGATTCC TGAAATAA
 
Protein sequence
MAELKNRSAY FEYAIEDKYI AGMVLTGTEI KSIRGSRVSF NDSFCYFSKG ELFVKSLHIS 
EYTHGTYSNH DPLRERKLLL TKRELRKLEN KIKERGYSII PLRIFITDKS LAKIEIGLGK
GKKLHDKRDS IKQRETDREI RRFLK