| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3628 |
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| Symbol | |
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| ID | 8359795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4554007 |
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| End bp | 4554714 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965797 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003123291 |
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| Protein GI | 256422638 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0184746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA GATGCGTCAT CACAGATGAT GAACCCTATG CAAGAAAAGG ACTACAAGGC
TATATCAGTC AGATAGATTT CCTGGAATTA GTAGCGGTAT GCGAAAGCGC CGTCGAACTG
AACACTTTTC TTAAAAAAGA ACAAGTGGAT CTCTTATTTC TCGATATAGA AATGCCTTAT
CTGTCCGGAA TAGAGTTGTT GAAAACGCTG GCTCATCCAC CGAAAGTAAT ATTTACCACC
GCATATGAGA AATATGCGAT GCAGGGATAT GAACTGGAAG TATTGGATTA CCTGTTGAAG
CCTATTTCGC TGGACCGCTT TCTCCGGGCA GCCAATAAAG CCTTTGATTA TTTCAATCTG
CAGGAGCAGG TGAAACCACG GGAGGACTAC TTTTTTATCA AAGTAGACAG TAAGCTGGAA
AAGGTCCTGG TAGAAGACAT CTTATTTGCC GAAGGCATGG AAAATTATAT TACCATCCAT
ACGAAGCAGA AAAAGATGAT AACGCACCTG ACCCTGAAGA TGCTGCAGGA ACACCTGCCG
GCAGATAAGT TTATACAACC GCATAAGTCT TATATAGCAG CCATTGACAA AATAGACGCC
ATAGAAGGTA ATGTATTGCT ACTGGGCGGG TATCAGGTGC CAGTGTCCCG TTATCAGAAG
GAAGAGATCA TGGAAAGGAT CCTGCAGAAC AGGATCCTTA AAAGATGA
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| Protein sequence | MKIRCVITDD EPYARKGLQG YISQIDFLEL VAVCESAVEL NTFLKKEQVD LLFLDIEMPY
LSGIELLKTL AHPPKVIFTT AYEKYAMQGY ELEVLDYLLK PISLDRFLRA ANKAFDYFNL
QEQVKPREDY FFIKVDSKLE KVLVEDILFA EGMENYITIH TKQKKMITHL TLKMLQEHLP
ADKFIQPHKS YIAAIDKIDA IEGNVLLLGG YQVPVSRYQK EEIMERILQN RILKR
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