Gene Cpin_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3613 
Symbol 
ID8359780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4507075 
End bp4507668 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID644965782 
Producthypothetical protein 
Protein accessionYP_003123276 
Protein GI256422623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.265269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000230131 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAACG ATAGAGTAAT AGTCAGAAAG GCGGTGCTCT CCGACTGTAA ATATGCCGCT 
ATGATCACGG CTGAAATGGA AGCATCCGCC AAAGCAAGGG GTACCGGTAT CAGCAAACGT
TCCGTATCCG CTATTATGAA AAAGATCAGA GAAGGAAAAG CCGTTATCGC ACTGACAGTA
AATAAGATCT GGGTAGGATT CTCTTATATA GAGAGCTGGA GCAACGGAGC ATTTGTATCC
AACTCAGGTA TGATTGTTAA TCCGACGTTC CGCGGACAAG GAATTGCCTC CCGCATCAAA
AGAAGAATAT TCCAGTTGTC ACGTGAAAAA TATCCGGAGG CAAAACTATT CAGCATTACA
AGTGGACTGG CCATTATGCG CATGAACAGC AAATTAGGTT TTTTACCAGT CACCTTTAAT
GAAATAACCA AAGACCCTGA ATTCTGGAAA GGATGTAAGA GTTGTGTTAA CTTTAATATC
CTGCAAAAGA AAGGGTGCCG GAACTGCCTC TGTACGGCAA TGCTTTACAC GCCTCCTGCC
GTGCAAAAAG AAGAAGAAAA AGAAGGGTTG CTGTCAACAG CAGGCGCTTA CTAA
 
Protein sequence
MDNDRVIVRK AVLSDCKYAA MITAEMEASA KARGTGISKR SVSAIMKKIR EGKAVIALTV 
NKIWVGFSYI ESWSNGAFVS NSGMIVNPTF RGQGIASRIK RRIFQLSREK YPEAKLFSIT
SGLAIMRMNS KLGFLPVTFN EITKDPEFWK GCKSCVNFNI LQKKGCRNCL CTAMLYTPPA
VQKEEEKEGL LSTAGAY