Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3613 |
Symbol | |
ID | 8359780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4507075 |
End bp | 4507668 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965782 |
Product | hypothetical protein |
Protein accession | YP_003123276 |
Protein GI | 256422623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.265269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000230131 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAACG ATAGAGTAAT AGTCAGAAAG GCGGTGCTCT CCGACTGTAA ATATGCCGCT ATGATCACGG CTGAAATGGA AGCATCCGCC AAAGCAAGGG GTACCGGTAT CAGCAAACGT TCCGTATCCG CTATTATGAA AAAGATCAGA GAAGGAAAAG CCGTTATCGC ACTGACAGTA AATAAGATCT GGGTAGGATT CTCTTATATA GAGAGCTGGA GCAACGGAGC ATTTGTATCC AACTCAGGTA TGATTGTTAA TCCGACGTTC CGCGGACAAG GAATTGCCTC CCGCATCAAA AGAAGAATAT TCCAGTTGTC ACGTGAAAAA TATCCGGAGG CAAAACTATT CAGCATTACA AGTGGACTGG CCATTATGCG CATGAACAGC AAATTAGGTT TTTTACCAGT CACCTTTAAT GAAATAACCA AAGACCCTGA ATTCTGGAAA GGATGTAAGA GTTGTGTTAA CTTTAATATC CTGCAAAAGA AAGGGTGCCG GAACTGCCTC TGTACGGCAA TGCTTTACAC GCCTCCTGCC GTGCAAAAAG AAGAAGAAAA AGAAGGGTTG CTGTCAACAG CAGGCGCTTA CTAA
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Protein sequence | MDNDRVIVRK AVLSDCKYAA MITAEMEASA KARGTGISKR SVSAIMKKIR EGKAVIALTV NKIWVGFSYI ESWSNGAFVS NSGMIVNPTF RGQGIASRIK RRIFQLSREK YPEAKLFSIT SGLAIMRMNS KLGFLPVTFN EITKDPEFWK GCKSCVNFNI LQKKGCRNCL CTAMLYTPPA VQKEEEKEGL LSTAGAY
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