Gene Cpin_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3605 
Symbol 
ID8359772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4497719 
End bp4498243 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID644965775 
ProductNusG antitermination factor 
Protein accessionYP_003123269 
Protein GI256422616 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.358379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000423635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACG GAACACCAGT CGCCCCATTA GTAGACACAA AATGGTATGT AGCTTACACG 
CGCGCAAACT TTGAGAGGAA GGTAGCAAAA GACATTGTCG ATCAGCAGAT AGAACACTAT
CTGCCGCTCC GGAGGGAGAC GAGGAAGTGG AGTGACAGGC TGAAGCAGAT AGAGGTGCCC
CTGTTCCCAA ATTACATCTT TGTAAAGATA AAGTTGCAGC ACAAGGTCAA TATACTGGGC
ATCCCCGGGG TGCTTTCGCT GGTGTCGTTC AGTGGTCAGC CGGTAAGCGT CAGCGAGCGT
GAGATACAAC ACATCAGGAA GATTGAGGAG AGAGGCCAGG ATATTGCCCT GGAATATTAT
TACTGTGTAG GAGATCGTGT TCGTATTACA CAGGGCATCT TTACCGGGAT GGAAGGGATC
TTACTACGGA AATCAGGTCA GATGCGGTTT GTATTGAAAT TGCCTGCTAT CAGCCAGGCG
GTTTCTGTGG AAATAGAAGG TGATCAGCTG GAAAGAATAG ACTAA
 
Protein sequence
MKNGTPVAPL VDTKWYVAYT RANFERKVAK DIVDQQIEHY LPLRRETRKW SDRLKQIEVP 
LFPNYIFVKI KLQHKVNILG IPGVLSLVSF SGQPVSVSER EIQHIRKIEE RGQDIALEYY
YCVGDRVRIT QGIFTGMEGI LLRKSGQMRF VLKLPAISQA VSVEIEGDQL ERID