Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3605 |
Symbol | |
ID | 8359772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4497719 |
End bp | 4498243 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965775 |
Product | NusG antitermination factor |
Protein accession | YP_003123269 |
Protein GI | 256422616 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.358379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000423635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG GAACACCAGT CGCCCCATTA GTAGACACAA AATGGTATGT AGCTTACACG CGCGCAAACT TTGAGAGGAA GGTAGCAAAA GACATTGTCG ATCAGCAGAT AGAACACTAT CTGCCGCTCC GGAGGGAGAC GAGGAAGTGG AGTGACAGGC TGAAGCAGAT AGAGGTGCCC CTGTTCCCAA ATTACATCTT TGTAAAGATA AAGTTGCAGC ACAAGGTCAA TATACTGGGC ATCCCCGGGG TGCTTTCGCT GGTGTCGTTC AGTGGTCAGC CGGTAAGCGT CAGCGAGCGT GAGATACAAC ACATCAGGAA GATTGAGGAG AGAGGCCAGG ATATTGCCCT GGAATATTAT TACTGTGTAG GAGATCGTGT TCGTATTACA CAGGGCATCT TTACCGGGAT GGAAGGGATC TTACTACGGA AATCAGGTCA GATGCGGTTT GTATTGAAAT TGCCTGCTAT CAGCCAGGCG GTTTCTGTGG AAATAGAAGG TGATCAGCTG GAAAGAATAG ACTAA
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Protein sequence | MKNGTPVAPL VDTKWYVAYT RANFERKVAK DIVDQQIEHY LPLRRETRKW SDRLKQIEVP LFPNYIFVKI KLQHKVNILG IPGVLSLVSF SGQPVSVSER EIQHIRKIEE RGQDIALEYY YCVGDRVRIT QGIFTGMEGI LLRKSGQMRF VLKLPAISQA VSVEIEGDQL ERID
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