Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3533 |
Symbol | |
ID | 8359700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4397944 |
End bp | 4398747 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965704 |
Product | putative esterase |
Protein accession | YP_003123198 |
Protein GI | 256422545 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0813292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.433428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACA GAAAAATTAA AGGGGCTTTT ATCGGAGTGC TCTGCGCACT CCTTATTTTC TCGAATGGCT TTGCGCAGTC TGATAAATCC AAACCGCCTG TATATGTACT CGTACACGGC GCCTGGCATG GCGGATGGTG CTGGCAGAAA GTAAGCGCCA TACTGAGAGC CAAGGATGCA ATTGTCTATA CACCTACATT AAGTGGTCTC GGTGAACATA AGAACACACT CGACTCCAAC GTCAACCTAG ACACACATAT CTCAGATATC GTAAACTTTA TCGAAATGGA AGACCTTCAA GATGTCATCC TCGTCGGCCA TAGCTATGGT GGTACAGTGA TCGGAGGGGT GGCGGACAGG ATTCCGGAAA GACTGCGGAA GCTGGTATAC CTTGATGCAC TATTGCTGGA AAACGGACAA AGCGCCCTGT CGCTTCAGCC GCCTGCTGTA CAGCAAACAA TGGTACAGGC AGCTGCTCAT GACGGCGGAC TTACCATGCC TGCCTGGCCT GCAGCCGTAT TCGGCGTAAA GGATACCGCA GACGCACGCT GGGTGGACGC AAGATTGACT GGTCAGCCTT TCAGAACCTT CTCTCAGACA TTAACACTGC ATCATCCTTA CGGCAATCAT CTGCCAAAGA TCTTTATCGC CTGTACCGTA GATATGCTGC CCACTATCGT TCCATTTGCA GAGAAAACGA AGAAGAGCAA AGACTGGTCA TACTACGAAC TGGTAACAGG TCATGATGCC ATGATCACGG AACCGCAAAA GACAGCCGCC TTATTCTATT CATTTGCTAA ATAA
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Protein sequence | MNHRKIKGAF IGVLCALLIF SNGFAQSDKS KPPVYVLVHG AWHGGWCWQK VSAILRAKDA IVYTPTLSGL GEHKNTLDSN VNLDTHISDI VNFIEMEDLQ DVILVGHSYG GTVIGGVADR IPERLRKLVY LDALLLENGQ SALSLQPPAV QQTMVQAAAH DGGLTMPAWP AAVFGVKDTA DARWVDARLT GQPFRTFSQT LTLHHPYGNH LPKIFIACTV DMLPTIVPFA EKTKKSKDWS YYELVTGHDA MITEPQKTAA LFYSFAK
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