Gene Cpin_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3533 
Symbol 
ID8359700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4397944 
End bp4398747 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content49% 
IMG OID644965704 
Productputative esterase 
Protein accessionYP_003123198 
Protein GI256422545 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0813292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.433428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACA GAAAAATTAA AGGGGCTTTT ATCGGAGTGC TCTGCGCACT CCTTATTTTC 
TCGAATGGCT TTGCGCAGTC TGATAAATCC AAACCGCCTG TATATGTACT CGTACACGGC
GCCTGGCATG GCGGATGGTG CTGGCAGAAA GTAAGCGCCA TACTGAGAGC CAAGGATGCA
ATTGTCTATA CACCTACATT AAGTGGTCTC GGTGAACATA AGAACACACT CGACTCCAAC
GTCAACCTAG ACACACATAT CTCAGATATC GTAAACTTTA TCGAAATGGA AGACCTTCAA
GATGTCATCC TCGTCGGCCA TAGCTATGGT GGTACAGTGA TCGGAGGGGT GGCGGACAGG
ATTCCGGAAA GACTGCGGAA GCTGGTATAC CTTGATGCAC TATTGCTGGA AAACGGACAA
AGCGCCCTGT CGCTTCAGCC GCCTGCTGTA CAGCAAACAA TGGTACAGGC AGCTGCTCAT
GACGGCGGAC TTACCATGCC TGCCTGGCCT GCAGCCGTAT TCGGCGTAAA GGATACCGCA
GACGCACGCT GGGTGGACGC AAGATTGACT GGTCAGCCTT TCAGAACCTT CTCTCAGACA
TTAACACTGC ATCATCCTTA CGGCAATCAT CTGCCAAAGA TCTTTATCGC CTGTACCGTA
GATATGCTGC CCACTATCGT TCCATTTGCA GAGAAAACGA AGAAGAGCAA AGACTGGTCA
TACTACGAAC TGGTAACAGG TCATGATGCC ATGATCACGG AACCGCAAAA GACAGCCGCC
TTATTCTATT CATTTGCTAA ATAA
 
Protein sequence
MNHRKIKGAF IGVLCALLIF SNGFAQSDKS KPPVYVLVHG AWHGGWCWQK VSAILRAKDA 
IVYTPTLSGL GEHKNTLDSN VNLDTHISDI VNFIEMEDLQ DVILVGHSYG GTVIGGVADR
IPERLRKLVY LDALLLENGQ SALSLQPPAV QQTMVQAAAH DGGLTMPAWP AAVFGVKDTA
DARWVDARLT GQPFRTFSQT LTLHHPYGNH LPKIFIACTV DMLPTIVPFA EKTKKSKDWS
YYELVTGHDA MITEPQKTAA LFYSFAK