Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3528 |
Symbol | |
ID | 8359695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4393646 |
End bp | 4394878 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965699 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003123193 |
Protein GI | 256422540 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.339739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.944351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACAT TTACAATCAT TACAGCTCTG ATCACAATAA GCGCATTGAT TTCCTACATT AATCTTCGAT TTATCAAACT GCCTGGTGCC ATCGGCGTAA TGTTTGTATC TATCCTGCTG TCCGTATTTA TACTGGTGAC GGGTAAGGCA TTTCCGGTTG CATTCAACTT TATCCGTGAG CTTACCGAGA GCATTGACTT TACAAAAACG CTCCTGGATG TCATGCTGGC CTTCCTCTTA TTTGCCAGTG CTTTTCACTT TGAGTATAAA AAGCTGAAGG AGCAGAAACG TCCGGTGTTG GTACTCAGTA CAATTGGTGT GGTCGGCTCC ACTGTTATCT TCGGATTCCT GCTGGATATC ACCACTACCC TGCTGGGTAT AGATCTGCCA CTAGTGTATT GTTTCCTTTT TGGTGCATTG ATTTCACCTA CTGACCCTGT GGCGGTATTG TCTGTGCTGA AAAAATCCAG GATTCCGCAG TCGCTGGAAA CAATTATTTC AGGTGAATCC TTATTGAATG ATGGGGTTGG TCTGATTCTC TTTATTACGA TTGGCGAAGT AGCCGCACAG CAAGCTGCTT TCTCCTTTAC ACATGCGTTG GAGCTATTTG CTATAGAGGT ATTTGGCGGT CTGGCCCTGG GTACTGCGGT CGCTTTTGTG ACGGGTTATC TGACAAAGAA AATACAGGAA TTCCAGACAG CGATACTGGT ATCCATCTCT ATGGTAATGG CGATATCTGT ACTGGGAAGT CTGTTACATG TATCTATACC ATTGGCGGCG GTCGCTGCGG GCCTGATCCT TGGCAACACT TCTATCGGCG CCAAGACAAA TACAGAATTA CAGAATTACC TGCATCAGTT CTGGGAGCTG ATAGACGAAT TACTCAACAT TATCCTGTTT GTGATGATTG GTTTGCAGAT CGTGGTACTG CCTTTCATCG GCAATTACTG GTTCATTGGT ATGGTATCCG TATTGTTTGT ACTGGTGGCC AGAGGGGTGA GTATAGCAGT GCCTGCATTG GCATTACGCC GGTCTTTAAA GACGACATTC AGCACAACTG CGATCTTGGT ATGGGCAGGA TTGAGGGGCG GTATTTCGGT GGCGCTGGCA CTGTCACTCC CGGATTCTCC TTATAAGGAA TTAATATTAT CAGCGAGCTA TATTATCGTG ATCTTCTCCG TGATTGTACA GGGGCTAACC CTGAACAAGG TCGTAGACAG GTTCATCGAT TAA
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Protein sequence | MDTFTIITAL ITISALISYI NLRFIKLPGA IGVMFVSILL SVFILVTGKA FPVAFNFIRE LTESIDFTKT LLDVMLAFLL FASAFHFEYK KLKEQKRPVL VLSTIGVVGS TVIFGFLLDI TTTLLGIDLP LVYCFLFGAL ISPTDPVAVL SVLKKSRIPQ SLETIISGES LLNDGVGLIL FITIGEVAAQ QAAFSFTHAL ELFAIEVFGG LALGTAVAFV TGYLTKKIQE FQTAILVSIS MVMAISVLGS LLHVSIPLAA VAAGLILGNT SIGAKTNTEL QNYLHQFWEL IDELLNIILF VMIGLQIVVL PFIGNYWFIG MVSVLFVLVA RGVSIAVPAL ALRRSLKTTF STTAILVWAG LRGGISVALA LSLPDSPYKE LILSASYIIV IFSVIVQGLT LNKVVDRFID
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