| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3484 |
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| Symbol | |
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| ID | 8359650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4347954 |
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| End bp | 4348949 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965657 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123152 |
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| Protein GI | 256422499 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA ATAATTATGG AGGAGCGTTA CAACAACCGA TTGGTTCAGG GTTTAACGCA
ACATCAACTA CAAGTGATGT AATTAGAGGC ATAGACCTTA CAGGAAAGAT TGCGATCGTT
ACGGGTGGTA ATACAGGGAT CGGTCTGGAA ACGGTAAAGA CACTTTCTAA GGCAGGCGCA
ACAGTGATAG TACCCGCCAG AGATATTGAG AAAGCAAAAA AGAACCTGGC AGGAATCAGT
CATGTAGAAA TAGAAGAAAT GGACCTGATG GTACCTGATT CTATTGACCG CTTTGCTGAC
AAGTTCCTGG CTTCGGGAAG ACCTTTACAT TTGCTCATTA ATAATGCAGG AATTATGTTC
GTATCCTTAC GCCGTGATGT AAATGGATAT GAATCGCAGC TTGCTGTCAA CTATCTTGCG
GTATTCAGGC TTACGGCCAG GTTATGGGAA CCACTGAAAA AAGCGAATGG GGCCCGCATC
GTGAATGTAT CCTCCCTGGG ACATCATTTT GCCCCTTTCA ATTTTGAAGA TCCGAATTTT
GCACATAGTG AATATCAGAC TTTACAGGCT TACGGACAGT CAAAAACTGC TGTCAATCTT
TTTTCGCTTG AGCTGAATGA ACGAGCGAAG GCGTTCGATG TAAGGGTATA TTCGCTGCAT
CCCGGGAATA TCTGGGGGAC AGAATTAACG AGAGAAGCAC CATTGGAGAT ATTACAGCAA
TTTGGTTTTT ATGATGAGCA TGGAAATCCG GTGCAGGCAG TGATTGATTC GCTGAAAACC
ATTCCACAAG GTGCGGCGAC AACTATATGG GCTGCTACGA GTCCGCTGTT AAAGGAGATT
GGTGGTGTGT ATTTAGAAGA TGTTGATGTG GCTGCACTGG CGGTTGATGC ATCGGTACCT
AATGGTGTAA AGCCGTATTC ATTGGATGAA GCGAGCGCAA AATCATTGTG GAAATTGACG
GAGGAATTGA CGGGCGTTAG ATTTAATGTG GGTTGA
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| Protein sequence | MAQNNYGGAL QQPIGSGFNA TSTTSDVIRG IDLTGKIAIV TGGNTGIGLE TVKTLSKAGA
TVIVPARDIE KAKKNLAGIS HVEIEEMDLM VPDSIDRFAD KFLASGRPLH LLINNAGIMF
VSLRRDVNGY ESQLAVNYLA VFRLTARLWE PLKKANGARI VNVSSLGHHF APFNFEDPNF
AHSEYQTLQA YGQSKTAVNL FSLELNERAK AFDVRVYSLH PGNIWGTELT REAPLEILQQ
FGFYDEHGNP VQAVIDSLKT IPQGAATTIW AATSPLLKEI GGVYLEDVDV AALAVDASVP
NGVKPYSLDE ASAKSLWKLT EELTGVRFNV G
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