Gene Cpin_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3464 
Symbol 
ID8359630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4321154 
End bp4322278 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content49% 
IMG OID644965637 
Producthypothetical protein 
Protein accessionYP_003123132 
Protein GI256422479 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.803329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0415669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA TCGTTATAGG CGGCTCTATC GGCGGCCTGA GTACAGGCAT AGCCCTGCTG 
CAACAAGGCT TCGACGTGGA GATATATGAA CGGGCAGCAA AAGATATGAA AGACAGAGGC
GCGGGTCTTG TCATACAACC TGAAATGATG GACTACCTCA TGGAACATCG TATTGCACCG
AAGGACATAT TTGGCGTACC AGCCAGACAA AGACAGATCC TCGATGAAAA TGGTACTCCG
GTGCTGAGAT ATCCGAATGA TACACAGTTT ACCTCCTGGA ATTATCTCTG GCGTCAGCTT
AAAGACTATT TTCCGGCTGA AAGATATTTT TATGGCCACG AATTACAGGC GATCGGACAG
GATCCTTATG CTGTGACGGC CACATTTAGC AATGGGACAA AGGTGACGGC GGAATTACTG
ATCGGTGCAG ACGGATATAA CTCCATTGTG AGAAGGCAAA TATATCCTGC CGTGCTGCCG
GAATACGCTG GCTATGTCGC CTACAGGGGA CTGATTCCTG AACAGGAACT AACATTGGAA
GAGGCCGCCT TCTTCGCCGG TAAATTCACC CTCTTTCCTT ACGAGAACTC CCATTTGCTC
TCGTATATGG TACCAGGACC GGATGGTGAA CTGAAGAAAG GGAAACGTTT GTATAACTGG
GTGTGGTACC AAAATAAAAC AAATGCCGAA CTCGAAAAAT TACTCACCGA TAAAAACGGG
CAACAGCGAC AGTTTACGGT ACCAGCTGGC TCGATGAATG CAGACAGTCT GACGGCACTG
CACCAACTGG CCTATGAACA GCTGCCTCCT GTCTTACGCG ATCGCGTACG CCAGACCGCA
CATCCTTTCG TACAGGTCAT TTTTGATCTG GCCGTACCGG AGATGTACCA GGGAAGAGTA
GCTATCCTGG GAGACGCCGC TTTTGTGGTC AGGCCACACA CTGCTTCCGG TACAGCAAAA
GCTTACCGGG ATGCCATTGT ACTGGCGAAT AGTCTAAGCG ATTATGAAGA TATCGAAACA
GCGCTGGCTT ATTGGAGCGG ACAGCAAACC CGGTATGGAT TGGCGATCGT CAATCACGGC
AAACAACTGG CAGCCAGAAG CCGCTTAGGC GTGCAAATGG TATAA
 
Protein sequence
MKIIVIGGSI GGLSTGIALL QQGFDVEIYE RAAKDMKDRG AGLVIQPEMM DYLMEHRIAP 
KDIFGVPARQ RQILDENGTP VLRYPNDTQF TSWNYLWRQL KDYFPAERYF YGHELQAIGQ
DPYAVTATFS NGTKVTAELL IGADGYNSIV RRQIYPAVLP EYAGYVAYRG LIPEQELTLE
EAAFFAGKFT LFPYENSHLL SYMVPGPDGE LKKGKRLYNW VWYQNKTNAE LEKLLTDKNG
QQRQFTVPAG SMNADSLTAL HQLAYEQLPP VLRDRVRQTA HPFVQVIFDL AVPEMYQGRV
AILGDAAFVV RPHTASGTAK AYRDAIVLAN SLSDYEDIET ALAYWSGQQT RYGLAIVNHG
KQLAARSRLG VQMV