| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3460 |
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| Symbol | |
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| ID | 8359626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4315789 |
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| End bp | 4318230 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965633 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003123128 |
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| Protein GI | 256422475 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.292026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.144627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGAC ACATTCTTTT CTGCTGGCTA TTGTTATTGC CATGCACTGT ACTGAACGCA
CAACTTTTGC ATAATCCCAT TCCCCCCTCC TATAACAAGG ATATGCAAAG ACTGTTATTA
CTGGCCACCG GCAACTATCT GTATGCCGTC TCTCAGGGAC AGCTGGACAG AGACAGTGCC
ATGCTCTTTG TAACAGGTAC TTATAAATTG AGCAGGTTAA TGCCCTATAA TGAGGGATAT
AAAACCGGTC AGGACTATCC CGGTCAGGCA TTGATTGACG CCGGCAGGAT CGCGGAAGCA
GCCAGCCTTG TGAATACGGT GAAAGGCAGT CCCCGGCTAC AGCTATTGGC AGAACTGAGC
AACTATTACC TCCACCGGCC AGGTAGTATG CCGGAAGATC TGGCGGAAGC AGGCAGGTTT
ATCCATCTTT TACAACAGGA AAGCGAGACT GCGAAAGATA ATTTCTGGTT ATTACAGAGT
TACTGGCTGC TGGGCGCCCT TTACGCCGAC CAGGGGGATA TCCCGAAGAG TCAACCTTAT
TTCAGTCAGG GGGTCGCGCG CTGCAGGAAA TCAGGTGATA AAAGGTCGCT GCTGCTTTCT
CTCCTGTATC AGGCCAACGG ACTTCCCATC GGCACTCCAC AGAAAGAAAC CTATTTCCAG
GAAGCGCTCA CATTATCCAG GGACAATAAA TGGACCATGC TGCAATACTG GATTATGCAT
CATACCATAC TGGAACATTT TCGTACCAAC CCTCCGGTTG TGGAAAAGGA AATGATGGAA
GCACTGGCAC TGGAAAAAGA AATCGGCTAT CTGCACCATC AATATTCCTA TACCAATTTG
TCCTATGTGC ATGGACTGAG GGGAGACGCC ATACAGGGCA TCAAATACGC GGATCTGGCA
GTAAAAGCCA TGGAAGCGAC AAAAGACACC GCCTTCTCTT CACTCATCTG TATGCGTTTG
TCACAGATGT ATGGTAACGC AGAGGAAGTA GAAATGGCAT CCAAATGGAA CGAAAGAGCT
ATCAGCGTCC CATTGACGAA AGAAACCCAG ATAATATGGT ACAAAAGCTT TTTAGACAGG
CTGACACTGC TCCGGCGCAG AAAAACACCT GAGGAAGCAC TTAAACTGAT AGAGAAGTTC
AATCGCGAAC ATCCTGCGGA AACCATGTAT AATAAAATGA TGCTGACCAT TCAGGCGGCC
GGCGCTTATG AAGAATCAGG CAACATGCAG AAAGCGCTGG AGTCTTATCT TCAGTTCATT
GAAATAGCAA AAAAGTTCCC ACCACAATTT GCGTACGCGG AAACATTAAC GTCGTATAAT
GCAGTGGCCC GGTTTTATCT GACGACAGGC AACTTTGCAC TCGCCCGGAA ATACACGTCA
CTGACGCTTG AACACCCTAT TGGCAAAATA TCTGCGCCTG ACCTGGCACG CACCTATAAT
CTGCTGTATA GAATTGACTC CTCCACCGGC GACTATTTAT CGGCATTGAA AAATATGCAC
CAATACATGT ACTACCGGGA CTCTGTCTTC AGCATCTCCC AGCGTAAAGC AATGGACGGT
CTGATCATCA GGTACGAAAC ACAAAAGAAA GACCAGGACA TCCGCATCCT CAAACAGGAC
ACCCAGCTGC AAAAGGCAAA ACTGTCCCGC TCCGCCACTA TGGCCAAGAT CACATTGGGT
GGTATTGCCT TACTGCTGAT CATCGTAGGT TTGCTGTATA ACCAGTACCG TATCAAACGA
AAAGCCAGTC AGGAAGCCCT GGCCAGAAAC GAAGCATTGC AACAGCTGGT AGAGGAAAAA
GAATGGCTTC TGCGGGAAGT ACATCACCGC GTAAAAAACA ACCTGCAGAC GATCGTCAGT
CTGCTGGAAT CACAGTCAGC TTACCTCCAG AATGAAGCCT TACTGGCCAT CCAGGAAAGC
CAGAACAGGA TCTATGCCAT GTCCCTGATC CACCAGAAAC TCTATCACGA TGAAAACGTC
TCATCCGTTA ATATGGGCGT TTATCTCCCT GAACTGGTAC AGTACCTCCG TCTGAGCTAC
AACGTTAAAA ACAATGTGCT GTTCAATGTA CAGGTACATG ACGTAGAACT GGACGTATCT
CAGGCCATCC CTTTGGGACT GATCGTCAAT GAAGCGGTTA CCAATGCGAT CAAATACGCC
TTTCCTGTAC CGCAGACAGG CAATAGCATC AGTATTTCAT TGCTCGCTGA TGACGAACGC
GCGAAGTTGA CAATTACGGA TAATGGAGTG GGTATCCCGG GGGATATTTT ACAGGGGAAT
GTACGCGGAC TGGGGTTAAA ACTTATCTGC GGACTGGCAA ATGACATAGA AGGAGAACTC
TTGCTGAAAA ACAACGGAGG TGCGTCTGTT ACGATCTCCT TTGAAATAAG TCAGCCCTTG
CATAGCGTTG CAGGAAGCAA TACCGCCGCT ACAACAGCCT AA
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| Protein sequence | MYRHILFCWL LLLPCTVLNA QLLHNPIPPS YNKDMQRLLL LATGNYLYAV SQGQLDRDSA
MLFVTGTYKL SRLMPYNEGY KTGQDYPGQA LIDAGRIAEA ASLVNTVKGS PRLQLLAELS
NYYLHRPGSM PEDLAEAGRF IHLLQQESET AKDNFWLLQS YWLLGALYAD QGDIPKSQPY
FSQGVARCRK SGDKRSLLLS LLYQANGLPI GTPQKETYFQ EALTLSRDNK WTMLQYWIMH
HTILEHFRTN PPVVEKEMME ALALEKEIGY LHHQYSYTNL SYVHGLRGDA IQGIKYADLA
VKAMEATKDT AFSSLICMRL SQMYGNAEEV EMASKWNERA ISVPLTKETQ IIWYKSFLDR
LTLLRRRKTP EEALKLIEKF NREHPAETMY NKMMLTIQAA GAYEESGNMQ KALESYLQFI
EIAKKFPPQF AYAETLTSYN AVARFYLTTG NFALARKYTS LTLEHPIGKI SAPDLARTYN
LLYRIDSSTG DYLSALKNMH QYMYYRDSVF SISQRKAMDG LIIRYETQKK DQDIRILKQD
TQLQKAKLSR SATMAKITLG GIALLLIIVG LLYNQYRIKR KASQEALARN EALQQLVEEK
EWLLREVHHR VKNNLQTIVS LLESQSAYLQ NEALLAIQES QNRIYAMSLI HQKLYHDENV
SSVNMGVYLP ELVQYLRLSY NVKNNVLFNV QVHDVELDVS QAIPLGLIVN EAVTNAIKYA
FPVPQTGNSI SISLLADDER AKLTITDNGV GIPGDILQGN VRGLGLKLIC GLANDIEGEL
LLKNNGGASV TISFEISQPL HSVAGSNTAA TTA
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