Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3455 |
Symbol | |
ID | 8359621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4312710 |
End bp | 4313261 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965628 |
Product | methyladenine glycosylase |
Protein accession | YP_003123123 |
Protein GI | 256422470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0251027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATATT GCAGCGCTAT CGAATTCATG TCAGCAGAAA AGCAAGCTAT TCACAAAGCT TATCATGATA AACACTACGG CTTCCCTATC CATGATGATA ACGAGTTATT CTGCCGCCTG ATCATGGAGA TCAACCAGGC AGGTCTCAGT TGGGAAACCA TCCTCCGGAA AGAAGCTGGT TTCAGGAAGG CTTACAGCAA TTTCAACATC AAAAAAGTAG CTGCCTATAC GGAAGCCGAC CGTGAAAGAC TCATGGCAGA TCCCAATATT ATCAGGAACA GGCTGAAGAT CAATGCGGCT ATCGAAAACG CCAAAACGAT CCTGCAATTG CAGAAAGAAT ATGGCTCTTT TGAGAAATGG CTGGAAGCCC ATCACCCTAA AACCAAAGAA GAATGGGTGA AGCTGTTTAA GAAGACGTTC AAATTCACCG GCGGTGAGAT CGTGAATGAG TTTCTGATGA GTATCGGTAT GCTCCCGGGC GCACACAACA GCACCTGCGA GATCTACAAA AAGGTAGTAA AAGCCAACCC ACTCTGGGCA ACAAAACAAT AA
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Protein sequence | MSYCSAIEFM SAEKQAIHKA YHDKHYGFPI HDDNELFCRL IMEINQAGLS WETILRKEAG FRKAYSNFNI KKVAAYTEAD RERLMADPNI IRNRLKINAA IENAKTILQL QKEYGSFEKW LEAHHPKTKE EWVKLFKKTF KFTGGEIVNE FLMSIGMLPG AHNSTCEIYK KVVKANPLWA TKQ
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