Gene Cpin_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3455 
Symbol 
ID8359621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4312710 
End bp4313261 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID644965628 
Productmethyladenine glycosylase 
Protein accessionYP_003123123 
Protein GI256422470 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0251027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATT GCAGCGCTAT CGAATTCATG TCAGCAGAAA AGCAAGCTAT TCACAAAGCT 
TATCATGATA AACACTACGG CTTCCCTATC CATGATGATA ACGAGTTATT CTGCCGCCTG
ATCATGGAGA TCAACCAGGC AGGTCTCAGT TGGGAAACCA TCCTCCGGAA AGAAGCTGGT
TTCAGGAAGG CTTACAGCAA TTTCAACATC AAAAAAGTAG CTGCCTATAC GGAAGCCGAC
CGTGAAAGAC TCATGGCAGA TCCCAATATT ATCAGGAACA GGCTGAAGAT CAATGCGGCT
ATCGAAAACG CCAAAACGAT CCTGCAATTG CAGAAAGAAT ATGGCTCTTT TGAGAAATGG
CTGGAAGCCC ATCACCCTAA AACCAAAGAA GAATGGGTGA AGCTGTTTAA GAAGACGTTC
AAATTCACCG GCGGTGAGAT CGTGAATGAG TTTCTGATGA GTATCGGTAT GCTCCCGGGC
GCACACAACA GCACCTGCGA GATCTACAAA AAGGTAGTAA AAGCCAACCC ACTCTGGGCA
ACAAAACAAT AA
 
Protein sequence
MSYCSAIEFM SAEKQAIHKA YHDKHYGFPI HDDNELFCRL IMEINQAGLS WETILRKEAG 
FRKAYSNFNI KKVAAYTEAD RERLMADPNI IRNRLKINAA IENAKTILQL QKEYGSFEKW
LEAHHPKTKE EWVKLFKKTF KFTGGEIVNE FLMSIGMLPG AHNSTCEIYK KVVKANPLWA
TKQ