Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3441 |
Symbol | |
ID | 8359607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4292351 |
End bp | 4292836 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965614 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003123109 |
Protein GI | 256422456 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000970629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0913229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA CTAAATCAGC CGACAAAACG CCCCTCGACG ACCTGGATTT CTCTATTCTG ACTTACCTGC AGCAGGACGG CAGGATTTCC TTTACAGTCA TCGCTGAAAA GCTGCATGTA TCTATCGGTA CGATCCGTAC GCGTTTTAAT CGGCTGATTG AAGAAGGGAC GATTAATATT GTGGGCAGGG TGGATCCGGA GAAGGTGGGA TTCCATTCCT ATGCGCACAT TGCGGTATAT GTGAGACCGG CTACCTTAAA AGATGCGGTG GCGCAGCAGA TTGCCGTTAT GCCGGAAGTG AGTTTTCTGG CAATGACCTC CGGGGCTTAC GATCTCGAAG TAAATGTGAT GTGCAGGGAT AATGATCACC TGCTGGAATT TGTAAATGAG TTGTCTAAAC TGGAGGGGGT GTATCAGACG AAGACTACGC TTTATTTTAA AGTTTATAAG TATGCACAGC CGGACCTGGG GTTGTTGAAG AATTAA
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Protein sequence | MGKTKSADKT PLDDLDFSIL TYLQQDGRIS FTVIAEKLHV SIGTIRTRFN RLIEEGTINI VGRVDPEKVG FHSYAHIAVY VRPATLKDAV AQQIAVMPEV SFLAMTSGAY DLEVNVMCRD NDHLLEFVNE LSKLEGVYQT KTTLYFKVYK YAQPDLGLLK N
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