Gene Cpin_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3441 
Symbol 
ID8359607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4292351 
End bp4292836 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID644965614 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003123109 
Protein GI256422456 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000970629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0913229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA CTAAATCAGC CGACAAAACG CCCCTCGACG ACCTGGATTT CTCTATTCTG 
ACTTACCTGC AGCAGGACGG CAGGATTTCC TTTACAGTCA TCGCTGAAAA GCTGCATGTA
TCTATCGGTA CGATCCGTAC GCGTTTTAAT CGGCTGATTG AAGAAGGGAC GATTAATATT
GTGGGCAGGG TGGATCCGGA GAAGGTGGGA TTCCATTCCT ATGCGCACAT TGCGGTATAT
GTGAGACCGG CTACCTTAAA AGATGCGGTG GCGCAGCAGA TTGCCGTTAT GCCGGAAGTG
AGTTTTCTGG CAATGACCTC CGGGGCTTAC GATCTCGAAG TAAATGTGAT GTGCAGGGAT
AATGATCACC TGCTGGAATT TGTAAATGAG TTGTCTAAAC TGGAGGGGGT GTATCAGACG
AAGACTACGC TTTATTTTAA AGTTTATAAG TATGCACAGC CGGACCTGGG GTTGTTGAAG
AATTAA
 
Protein sequence
MGKTKSADKT PLDDLDFSIL TYLQQDGRIS FTVIAEKLHV SIGTIRTRFN RLIEEGTINI 
VGRVDPEKVG FHSYAHIAVY VRPATLKDAV AQQIAVMPEV SFLAMTSGAY DLEVNVMCRD
NDHLLEFVNE LSKLEGVYQT KTTLYFKVYK YAQPDLGLLK N