| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3421 |
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| Symbol | |
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| ID | 8359587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4257740 |
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| End bp | 4258426 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965594 |
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| Product | Thioesterase |
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| Protein accession | YP_003123089 |
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| Protein GI | 256422436 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00113491 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATTT TTTCGATTCC CTTTGCAGGA GGCAGCGTCT ATTCCCTGAA ACCCTTCGAA
ATCTATATGA ACGAAGGTGT GTGCTGGATA CCCCTCGAGC CGCCCGGCAG GGGAAGGCGG
ATAAGAGAAC CCCTGATCAG AGACCTGCAG CTGATGGCTT CGGATATTTT CAATCAGATC
AGGTCCGACT TAACAACTCC TTACGCTTTT TATGGACATA GTATGGGAGC CCTGCTCGCC
TACCTGGTCA CGCGGATGGC ACTCGATGCG GATCTGCCAC CACCAACCAG GTTGTTCCTG
TCAGGTTGTG GCGCCCCCGC CAGTAAGTCA AAACTACCTG GCAGACATAA GCTACCCAAA
ACGGAATTCT GGAAGGCTTT GAAAGACCTG GGTGGTAGTC CGGATGAAAT ATTGCAGAAC
GAAGACCTGC AACACTATTT CGAGCCGATT CTCCGCGCCG ATTTTGAGGC GATCGAAAAA
TATCACTATC AGCAAACAAC ACCCTTCGAC ATACCAGTTA CCGTCATTAT AGGATATGAT
GAATTTGTTA CCCGCGAAGA AGCCGAACAA TGGCAGATGG AAACGCTGGC GCCCATTGAT
GTTATATCCT ATCCAGGTAA TCATTTCTTC ATCTTCGACC GTGCATTTGA TATTGCACGC
CTGATCAAAA AAACGCTAAA CGTTTAA
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| Protein sequence | MNIFSIPFAG GSVYSLKPFE IYMNEGVCWI PLEPPGRGRR IREPLIRDLQ LMASDIFNQI
RSDLTTPYAF YGHSMGALLA YLVTRMALDA DLPPPTRLFL SGCGAPASKS KLPGRHKLPK
TEFWKALKDL GGSPDEILQN EDLQHYFEPI LRADFEAIEK YHYQQTTPFD IPVTVIIGYD
EFVTREEAEQ WQMETLAPID VISYPGNHFF IFDRAFDIAR LIKKTLNV
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