| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3396 |
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| Symbol | |
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| ID | 8359562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4164563 |
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| End bp | 4165294 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965569 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003123064 |
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| Protein GI | 256422411 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.655263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAATT GTTTAGTAGT AGACGATGAA CAGCACGCCA TAGACGTATT AACACACCAC
ATCAGTCAGA TACCGTTTTT GCAGCTGGTA AAATCAACTA CTAACGCCAT TGAAGCCCTG
CAGATCGTAA ACATGCAGAA AATAGACCTG GTGTTCCTGG ATATCCAGAT GCCTGAAATG
TCAGGACTGG ATTTTGCCAA AACCATACAG GGAAAAAGTA AAGTGATTCT GACCACCGCT
TACAGTGAAT TCGCGGCGGA AGGCTTTGAC CTGGAGGTAG TAGACTACCT GCTGAAGCCT
ATTCCTATGC CTCGTTTTCT GAAAGCTGTA CAGCGGGTAC TGAACATGGT CACTTCTTCA
GTGGCGGCGA CCCCGGTAGA AGACGCGTCT TCTATTGAAA ATGACTATAT TTTTCTGAAA
ACGGAATTTA AGGGCAAAAT GCTCAAGGTG AACCTCCGGG ATATCGACTA CATAGAAGGT
ATGAAAAACT ATGTAGCGAT TCACCACGCT GGGCAGAAAA CAATGGCCCT GCTCAATATG
AAAGACCTGG AAAGCAGATT GCCCAAAAAG CATTTTTACC GGGTGCACAA GTCATTTATC
GTGTCTTTAA GCAAGATTAT CGCCATTGAA GGCAGTATGA TCGTATTGAA GGATGTAAAG
GCTGAAATCC TGCTGGGAGA CACCTACAAG GCAGGTTTTT ACGACATCAT GAAAGACAAG
CTGATGGGCT GA
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| Protein sequence | MINCLVVDDE QHAIDVLTHH ISQIPFLQLV KSTTNAIEAL QIVNMQKIDL VFLDIQMPEM
SGLDFAKTIQ GKSKVILTTA YSEFAAEGFD LEVVDYLLKP IPMPRFLKAV QRVLNMVTSS
VAATPVEDAS SIENDYIFLK TEFKGKMLKV NLRDIDYIEG MKNYVAIHHA GQKTMALLNM
KDLESRLPKK HFYRVHKSFI VSLSKIIAIE GSMIVLKDVK AEILLGDTYK AGFYDIMKDK
LMG
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